Gene PA14_00160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_00160 
Symbol 
ID4385196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp16923 
End bp17240 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content65% 
IMG OID639322569 
ProductTPR repeat-containing protein 
Protein accessionYP_788170 
Protein GI116053735 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCG AAGGTCTGGA AAAGATGCTG GCCAAAGGCG TGGACAATGC GCTGCTGCGC 
TTCGGCCTGG GCAAGGGCTA CCTGGACGCG GGCGACGCCG AACGCGCGAC GGAACACCTC
CAGCGTTGCG TAGAGCAGGA CCCGACGTAT TCCGCTGGCT GGAAACTGCT GGGCAAGGCG
CGCCAGGCTG CCGGCGATCT CGCGGGCGCC CGGCAGGCCT GGGAGCAAGG CCTGGCAGCT
GCCGCGACGC ATGGCGACAA GCAGGCCGAA AAGGAAATGA CGGTGTTCCT GCGCAAGCTC
GATAGGGCGA GAACCTGA
 
Protein sequence
MMIEGLEKML AKGVDNALLR FGLGKGYLDA GDAERATEHL QRCVEQDPTY SAGWKLLGKA 
RQAAGDLAGA RQAWEQGLAA AATHGDKQAE KEMTVFLRKL DRART