Gene PA14_00080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_00080 
Symbol 
ID4385188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp8671 
End bp10377 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content67% 
IMG OID639322561 
Producthypothetical protein 
Protein accessionYP_788162 
Protein GI116053727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCC TGAAAAAGAC ACTGCACCTT TCAAGCTTGT CCCTCGTTTC CCTGGCTCTT 
TCTTCCGCCG CCCTGGCGGC CGCTCCGGTC ATGCTCGACC AGGGCAAGGA ATGGACCGAA
AGCCACCGCC AGGACTTCTA CAGCCGCGAC CAGGGCTCGC AGGTGATGCC CCTGCCCTGG
CTCAAGGCGT TGCGACAGCC GGATGGAACG CCTTTCCTCG CCGACAGCCT GGCCCGCTAC
GGCTATTTGC CCAATCCCAA GGCGCCCGCG GAAGGCCTGC CGGTGGGCTT CACCGTAGCC
GGCACGGGCG CCCGGCAGAT GGTCGGCATG ACCTGTTCGG CCTGCCATAC CCGGCAGATC
GAGGTGAAGG GCACGGCCTA TCGGATCGAC GGCGGTCCGG CGATCGTCGA CTTCCAGGCA
TTCCTCGCCG ACCTCGATCG GGCCGTGGGA CCGCTGACCA GCGATGACGC CGCCTTCGAC
GCCTTCGCCA AGCAGATCCT CGGGGCCAAT CCGCCTCCCG GTGCGCGCGA CGCCCTGCTC
GCGGCGGTGA AGGAATGGTA CGAGCCCTAT CACACGCTGA TCGAGCGCGC GCTGCCCAAG
GACACCTGGG GACCGGCGCG GCTGGACGCG GTATCGATGA TCTTCAACCG CCTTACCGGG
CTGGATATCG GCACCGCGCC GCCCTATCTG ATTCCCGACA ACATCAAGGC GGCGGATGCG
CCGGTGCGCT ACCCGTTCCT GTGGAACGCG GCGCGGCAGA ACAAGACCCA GTGGCCCGGC
TTCGCCGCCA ACGGCAACGA CCTGCTCGGC CTGGCGCGCA ATGTCGGCGA GGTCTACGGG
GTGTTCGCCA CCTTCCACCC GCAGAAGAGC AAGTTCCACC TGCTGGGCAT GGACTACCTG
AAGGTCAACT CGGCCAACTT CCACGGGTTG GGCAAGCTGG AGGAGCTGAT CAAGAAGATC
GGCCCGCCGA AGTGGCCCTG GGCGGTGGAC AAGCACCTGG CCAGGAAAGG CGCGCTGATC
TTCGCCCGCA AGACCGACGA GGGTGGCTGC GTGGAGTGCC ACGGCATCCG GATCAAGGAC
CTGGTGCTTT GGGACACTCC GCTGAGGGAC GTCGGCAGCG ACAGCCGCCA GCACGCCATC
CTCGATGGCC AGGTGCAGAC CGGCGTGATG GAGGGCGCGC GGATGCCGTT CGGCCAGCCG
CTGAAGGCGA CCGACGAAGC CTTCGATGTA CTCGCCGTAG CGGTGGCCGG TTCGATCCTG
CAGCACTTCG TGCCGATCCT CGGTGAGAAG CACGATGCCA AGGCGGCGGC GGTCAAGCCG
GAAAGCGTGA TGACCGACGA AACCCGGCAA CTGCTGACCG CCTTCCAGAA GCCGGTGCGT
ACCCAGGCCG ACCCCTACCC CTACGAGTCG CGGGTCCTGC AGGGGATCTG GGCGGCGGCG
CCGTACCTGC ACAACGGCTC GGTGCCGACC CTGGAAGAGT TGCTGAAGCC GGCCGCGGAG
CGGGTGGAAT CCTTCCCGGT GGGCTCGGCC TACGACGTGG ACAAGGTCGG CCTCGCCGCC
CAGCAGACCC AATTCGGCAG CTATGTGCTG AAGACCACCG GCTGCGAGCA GCGTGCTTCC
GGCAACAGCC GCTGCGGCCA TGAGTACGGC ACCAGCCTGT CGGCCGAGGA GAAGCGCGCG
CTGCTGGAGT ATCTGAAGGT CCTGTAG
 
Protein sequence
MKRLKKTLHL SSLSLVSLAL SSAALAAAPV MLDQGKEWTE SHRQDFYSRD QGSQVMPLPW 
LKALRQPDGT PFLADSLARY GYLPNPKAPA EGLPVGFTVA GTGARQMVGM TCSACHTRQI
EVKGTAYRID GGPAIVDFQA FLADLDRAVG PLTSDDAAFD AFAKQILGAN PPPGARDALL
AAVKEWYEPY HTLIERALPK DTWGPARLDA VSMIFNRLTG LDIGTAPPYL IPDNIKAADA
PVRYPFLWNA ARQNKTQWPG FAANGNDLLG LARNVGEVYG VFATFHPQKS KFHLLGMDYL
KVNSANFHGL GKLEELIKKI GPPKWPWAVD KHLARKGALI FARKTDEGGC VECHGIRIKD
LVLWDTPLRD VGSDSRQHAI LDGQVQTGVM EGARMPFGQP LKATDEAFDV LAVAVAGSIL
QHFVPILGEK HDAKAAAVKP ESVMTDETRQ LLTAFQKPVR TQADPYPYES RVLQGIWAAA
PYLHNGSVPT LEELLKPAAE RVESFPVGSA YDVDKVGLAA QQTQFGSYVL KTTGCEQRAS
GNSRCGHEYG TSLSAEEKRA LLEYLKVL