Gene P9515_18861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_18861 
Symbol 
ID4720536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp1675343 
End bp1676593 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content32% 
IMG OID640081587 
Productmajor facilitator superfamily multidrug-efflux transporter 
Protein accessionYP_001012200 
Protein GI123967119 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.779737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAA GTTTATTTAA GCCAAGTAGG AAATTCACAT TATTCAGTGC TTTTATAACT 
CTCTTAAATG ATCGTTTAAG TGAAAGTATT CTTTTGCCTA TTTTACCTTC TTTTGTTTTA
CTTTTTGATT CAAAAGCAAG TACTTACGGT TTACTATCCT GTACTTATCA ATTAGCACAA
TTTACAGCTT CACCATTTAT TGGGCTTATG AGTGACAGAT ATGGTAGAAG ACCTGTAACA
CTATTTTGTA TAACTGGCTC AATAATCGGA ATCTCAATAC TATCATTTAC AGTTTTATTT
GATTGGTCAA ATTCAATAGC TACTATTCCC TTATTTTTAT TATTTATAGC AAGACTTATA
GACGGGCTCA GTGGTGGGAC TGCAGCAACA GCGACTACCA TCCTTGCAGA TATTTCTAGC
CCTGAAAAAA GAGCCAAAAC ATTTGGACTT ATTGGGGTTG CCTTTGGATT AAGTTTTTTC
TTAGGAAATA TATTTGTTGT AATTTTTGCT AAAAATACAA ATAATAATTT CATTATTCCC
GTAATAATAG CTTCAATTAT TCCAATTATT AACTTTATAC TAGTCCTTTT TTATTTACCA
GAAACTAAAC CTCAAAACGA ATTAAACAAA TCACCCCAAA TGTTGAAAAA TCCTTTAAAA
AAATTATTTA AAGTATTTAA AGAAGATAAA ATCAGAAAAC TATCTCTAGC TTTTTTTATA
TATTTCATAG CTTTTACTGG ACTAACGAAC ATTTTAATAT TCTTCCTTCA AGAGTCTCTT
AATTGGACAA CTAAGGCATC AAGTGGAACT CTTGTCGTCG TAGGCGTGAT AGCAATAATT
GTACAGGGTG GACTAATTGG TCCCTTAGTA AAAAGATTTG GCGAAATGAA ACTCACCTTA
ATTGGTTCAG GTTTTATTCT TCTAGCATGT ATCCTTTTGA TAACTACCCC TAAAGAAAAT
GCGGCAATAA ATATTTATTC TGCAGTATCA TTTTTAGCCA TAGGTGCAGG ATTAATTACA
CCTACCTTGA GAGCATTAAT ATCTAAAAAA TTAGACGGAG ATAACCAAGG ATCGATATTA
AGTAATTTAC AAGGTCTTCA AAGTCTTGGA GGGGTATTAG GTATCGGTAT GGCTGGGAGA
GTTTATGACG ATTTTGGTCC TAAAGCACCA TTTATTGCAG GATCAATTAT CTTAATTTTT
ATGATTTACC TTATTGCTGA AGGGAGAGGT AACAAAATTT CTTATAATTA A
 
Protein sequence
MKKSLFKPSR KFTLFSAFIT LLNDRLSESI LLPILPSFVL LFDSKASTYG LLSCTYQLAQ 
FTASPFIGLM SDRYGRRPVT LFCITGSIIG ISILSFTVLF DWSNSIATIP LFLLFIARLI
DGLSGGTAAT ATTILADISS PEKRAKTFGL IGVAFGLSFF LGNIFVVIFA KNTNNNFIIP
VIIASIIPII NFILVLFYLP ETKPQNELNK SPQMLKNPLK KLFKVFKEDK IRKLSLAFFI
YFIAFTGLTN ILIFFLQESL NWTTKASSGT LVVVGVIAII VQGGLIGPLV KRFGEMKLTL
IGSGFILLAC ILLITTPKEN AAINIYSAVS FLAIGAGLIT PTLRALISKK LDGDNQGSIL
SNLQGLQSLG GVLGIGMAGR VYDDFGPKAP FIAGSIILIF MIYLIAEGRG NKISYN