Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_18581 |
Symbol | gcvP |
ID | 4720436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1645556 |
End bp | 1648465 |
Gene Length | 2910 bp |
Protein Length | 969 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640081558 |
Product | glycine dehydrogenase |
Protein accession | YP_001012172 |
Protein GI | 123967091 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCCT CAATTAACTC GGATTTATTT ATTGGAAGGC ATCTTGGATT GAAGGAGAAT GATGAGAAAA AAATGCTTCA AAAACTTGGC TTTAATAACA TAGACGAATT TATTAATCAA GTTATTCCTG AAGATATTCA GTTTAAAGAA AAATATTCAA ATAGCCTGCC AATAGGCTGT TCTGAGATTG AGGCATTGAA CGAATTAGAA GAAATATCTA ATAAAAATCA TAAAATAAGA TCCTTAATCG GTCTTGGATA TTATGGTACC CATACTCCAA AGGTTGTCCA AAGGCATGTA TTAGAAAACC CCAGATGGTA TACAGCTTAT ACCCCTTATC AAGCAGAAAT TGCGCAAGGC AGATTAGAAG CTTTATTTAA TTTTCAAACT TTAATTTGTG AATTGACAGC ATTCTCAGTG GCTAATGCTT CGCTTTTAGA TGAGGGAACA GCTGCTGCAG AAGCAATGAC AATGAGTTTT TCCGCCAGGA AAAATAAGTC CTCAAATATT TTTTTAGTAG ATGAAAATGT TTTTGATCAT ACATTTAATG TTTTATTGAC GAGAGCTAAA CCATTAGGAA TTGATTTAAA ACGTTTTAAT CAAAAGCACC TTAAAAATTA TGATGATGTT TTTGGTCTCT TAATTCAGCT TCCTGGGAAA AATGGAGAAT TATTTGATCC AACATTTTTA GTTTCCCAAG CTCAAAAAGC AGAAATCATT GTTACATCAA TTATTGATCC TCTTGCGCAA GTTTTAATAA AACCAATAGC CGAATTTGGA GTAGATATAG CTGTTGGAAG TCTTCAAAGA TTTGGGGTCC CAATGGGCTT TGGTGGTCCT CATGCAGCAT TTTTTGCATG TAGTGAAAAA TATAAAAGAC TTATACCCGG AAGAATAGTA GGGCAAACTC TATCTAAAAA CGGAGAACAA TCACTGAGAT TGGCACTACA AACAAGAGAA CAACATATAA GAAGAGAAAA AGCGACTAGT AATATTTGTA CAGCTCAATC GTTGCTAGCA ATAATTTCCT CTTTTTATGC CATCTATCAT GGTGCTAATG GCTTAACAAA AATGGCTAAG AGGTTAGTTT TATTAAGAAG ATATTTAGAA TCGTGTCTTT GTGAGTTAGG TTTCAAAATA CCTCTTGGGA ATAGGTTTGA TAGTGTGGAT ATTTACTGCG AGGAATCTGA AAAGATTCAT AAAGAAGCTT TGAAAAACGG ATTTAATTTT AGAATTTTAC CTTTGGGTTC GTCGATTGAG GATTCTACAG GATTTGGAAT TTCCCTAGAT GAGCTTACTG ATGAAAATGA AATCCGTAAA ATAGTTAGCT TAATAGCAAA TGGTGTCGGT AAAAAAGAAG ATTTTAAACA CATTAAAGTT AATAATTCTT TTCATTTTGA AGGTATTCCT CTAAGAAATA AAGAATGGAT GCAACAAAAT ATATTTGAGA ACTATCAAAG TGAGACTGAT TTAATGAGGT ATATTTTTAA ACTTGCTGAG AAAGACTTTT CACTGGTTGA TGGAATGATT CCGCTGGGAA GTTGTACTAT GAAATTAAAT TCTGCAGCAG AGCTTAGTCC AATTTCATGG GCTAATTTAT CTTCAATTCA TCCTTTCGCT CCAGCTAATC AAACTAGAGG TTATTCAAAA ATAATAAGTG ATCTTGAGAA ATGGATTAGT GAACTTATTG GTTTGAATTC AGTTTCGTTC CAACCAAATG CAGGCTCTCA AGGTGAGTTT GCGGGTCTAT TGGCAATTAA TTCTTATTTC GCTTCAAAAG GCGATTTAGC AAGAAAAAAA TGCTTAATTC CACAAAGTGC TCATGGAACA AATCCTGCTA GCGCTGTTAT GGCAGGTTTT GATGTTGTAA CTATAAAATG TGATTCTGAG GGTAATATTT CATATGAGGA TTTATTAATT AAGGTCAAAG AACTAGATAA TAAAATCGGT GCATTAATGC TAACTTATCC CTCTACTCAT GGAGTTTTTG AATTAAAAAT CAAAGAAATT TGTGAATTAA TTCATTCAGT TGGCGCATTC GTTTATTTGG ATGGGGCCAA TCTTAATGCT CAGGTCGGAT TGTGTAAGCC TGGAGATTAT GGCGTGGATG TCTGCCATTT GAACTTACAT AAAACTTTTT GTATACCTCA TGGCGGCGGC GGACCAGGTG TTGGTCCAGT TGCAACATCT GATATTTTAA GTCCTTTCCT TCCTTCCCAT TCTTTAACAG ATAACATTTT TAGTCACCTT GGATATTCTG TATCTTCTTC ACAGCACGGA AGTGCAAGTA TTCTTCCAAT AAGCTGGATG TATATTAAGA TGGCCGGTCA AAGCGGTTTA AGGAAGGCGA GTACTCATGC AATATTGTCA GCAAATTATA TTGCTAATAA ATTAAAAAAT AAATTTAGGA TTTTATATAA AGGACAAAAT AACTTCGTTG CTCATGAATG CATTCTTGAT TTTCGGGATT TGAAGTCAAA AACAGGTTTA AGTGTAAATG ATATAGCCAA AAGATTAATA GATTATAGTT TTCATGCTCC AACAATAAGT TGGCCGGTTC CTGAGACTAT TATGATTGAG CCGACAGAAA GTGAAAGTTT GACAGAATTA AACAGATTTT GTGAAGCTAT GCTTTTAATA AGCGAAGAAA TTGAAGAAAT TGAAAACAAT ATTGATCTTA AAAATAATAA TCTAATTAGT AATGCTCCTC ATACCATAAG TGAATTGATC TCAGATAATT GGAATTATCC TTATTCAAAA GAAAAGGCTG CATATCCTTA TAAAGGTAAA TACGAATATA AATTTTGGTC TTCAGTATCA AGGATTGATA ATGCTTATGG AGATAGAAAT TTAATTTGTT CTTGTAATGT CAATGATCAA GATTTCTTAG AGGAGAAAAA ATGTGCTTAA
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Protein sequence | MNPSINSDLF IGRHLGLKEN DEKKMLQKLG FNNIDEFINQ VIPEDIQFKE KYSNSLPIGC SEIEALNELE EISNKNHKIR SLIGLGYYGT HTPKVVQRHV LENPRWYTAY TPYQAEIAQG RLEALFNFQT LICELTAFSV ANASLLDEGT AAAEAMTMSF SARKNKSSNI FLVDENVFDH TFNVLLTRAK PLGIDLKRFN QKHLKNYDDV FGLLIQLPGK NGELFDPTFL VSQAQKAEII VTSIIDPLAQ VLIKPIAEFG VDIAVGSLQR FGVPMGFGGP HAAFFACSEK YKRLIPGRIV GQTLSKNGEQ SLRLALQTRE QHIRREKATS NICTAQSLLA IISSFYAIYH GANGLTKMAK RLVLLRRYLE SCLCELGFKI PLGNRFDSVD IYCEESEKIH KEALKNGFNF RILPLGSSIE DSTGFGISLD ELTDENEIRK IVSLIANGVG KKEDFKHIKV NNSFHFEGIP LRNKEWMQQN IFENYQSETD LMRYIFKLAE KDFSLVDGMI PLGSCTMKLN SAAELSPISW ANLSSIHPFA PANQTRGYSK IISDLEKWIS ELIGLNSVSF QPNAGSQGEF AGLLAINSYF ASKGDLARKK CLIPQSAHGT NPASAVMAGF DVVTIKCDSE GNISYEDLLI KVKELDNKIG ALMLTYPSTH GVFELKIKEI CELIHSVGAF VYLDGANLNA QVGLCKPGDY GVDVCHLNLH KTFCIPHGGG GPGVGPVATS DILSPFLPSH SLTDNIFSHL GYSVSSSQHG SASILPISWM YIKMAGQSGL RKASTHAILS ANYIANKLKN KFRILYKGQN NFVAHECILD FRDLKSKTGL SVNDIAKRLI DYSFHAPTIS WPVPETIMIE PTESESLTEL NRFCEAMLLI SEEIEEIENN IDLKNNNLIS NAPHTISELI SDNWNYPYSK EKAAYPYKGK YEYKFWSSVS RIDNAYGDRN LICSCNVNDQ DFLEEKKCA
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