Gene P9515_17241 details

Gene Information

• Locus tag: P9515_17241
• Symbol: rpsE
• ID: 4719806
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: -
• Start bp: 1520966
• End bp: 1521586
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640081418
• Product: 30S ribosomal protein S5
• Protein accession: YP_001012038
• Protein GI: 123966957
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGACA CTCCAACAAA AAACGAAAAT CAGTCCAAAG CTGATAATTT ACCTCCATCA 
AATCCTAACG ATCAGAGGAA AGGTAATCGT AACAATGATC GAAAAAGAAA TAGAAGAGGT 
GATTCTAAAA ATGAGAGAGA TTCTGAGTGG CAAGAAAGAG TTGTGCAAAT CAGAAGGGTA 
TTCAAAACTG TAAAAGGTGG AAAAAAAATG AGTTTTAGAG CAATTGTTGT TGTGGGGAAT 
GAAAAAGGTC AAGTAGGAGT AGGAGTCGGG AAAGCAGGAG ATGTTATTGG AGCAGTAAGA 
AAAGGAGTTT CAGATGGCAA AAAACATCTT GTTAGAGTCC CTCTAACCCC AAATAATTCA 
ATACCAACTT TATCTAAAGG TAGAGATGGA GCTGCAAATG TTCTTATAAG ACCTGCTGCT 
CCAGGTACCG GTGTAATTGC TGGAGGTTCA ATAAGGACGG TTTTAGAATT AGCAGGCATA 
AAAAATGTTT TAGCTAAAAG ATTGGGTAGT AAGACTCCTT TAAATAATGC AAGGGCTGCA 
ATGGTGGCTC TCTCTCAATT AAGAACCCAC AAATCTGCCT CTAGGGAGAG AGGTATTTCT 
CTTGAACAGC TTTATTCTTA A 

 

Protein sequence

MTDTPTKNEN QSKADNLPPS NPNDQRKGNR NNDRKRNRRG DSKNERDSEW QERVVQIRRV 
FKTVKGGKKM SFRAIVVVGN EKGQVGVGVG KAGDVIGAVR KGVSDGKKHL VRVPLTPNNS 
IPTLSKGRDG AANVLIRPAA PGTGVIAGGS IRTVLELAGI KNVLAKRLGS KTPLNNARAA 
MVALSQLRTH KSASRERGIS LEQLYS