Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_15231 |
Symbol | |
ID | 4720594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 1355171 |
End bp | 1355920 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640081215 |
Product | NAD-dependent DNA ligase N-terminus |
Protein accession | YP_001011837 |
Protein GI | 123966756 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.303288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTCGT TATTAGAAAA AAATGTTAAA CATCTTGATG AACAATATAG AATAGGCAAC GCTCTAATAT CAGATAAAGC TTTTGATCAA CTTGAAAAAA ACTTACTCCG AACAGATCCA CAATGTGATT ACTTTAATCA AAAAAATAAT TTATTACTTC CCTCATTGGC TAATGAAAAC CATATAGAGT TTTTAGCGAG CTTGTTAAAA AACACAAGAT TGAGCATTCA ACCAAAAATT GATGGATGTG CTATTGCAAT TAATTATATA AATGGCAAGT TTAATAAAGC CATTACAAGA ACAGGATTTG ATGTCACAAG CAAAATTAAA AAGATTAAAG ATGTCCCCAG TCGCCTTCCT ATCCAACGAG ATTTTCAAGT TAGAGGTGAG CTTTACTCCC CAAACCAAAC TCCCTATTTT TCCCAAAAAA TTACAAGCGA ATTCCTCAAC AATAAAAAAA GGATTGCAAA AAGTTTCAGC TTTTGCTGTT TCCAAATACT TAATGGAAGA CTTAACCAGT ATGAAACCCT TAACTATCTT AAAAAATGTG GCTTTAACAC CCCTCACAGT TACTTCACTA ATTTTACAAG CCAAGTCGAG TTATTTAGAA AAAGATGGTT AGATGGAAAA ATTTTTTCAA AATACCCAAC TGATGGAATT GTCATCAAAA TAAATAGTAG AAAATTGCAG TTGCTTAGAG AAACAAATCT TTCAAAATAT AATGAATGGC AATATGCAAT TAAAAAATAA
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Protein sequence | MGSLLEKNVK HLDEQYRIGN ALISDKAFDQ LEKNLLRTDP QCDYFNQKNN LLLPSLANEN HIEFLASLLK NTRLSIQPKI DGCAIAINYI NGKFNKAITR TGFDVTSKIK KIKDVPSRLP IQRDFQVRGE LYSPNQTPYF SQKITSEFLN NKKRIAKSFS FCCFQILNGR LNQYETLNYL KKCGFNTPHS YFTNFTSQVE LFRKRWLDGK IFSKYPTDGI VIKINSRKLQ LLRETNLSKY NEWQYAIKK
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