Gene P9515_15231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_15231 
Symbol 
ID4720594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp1355171 
End bp1355920 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content31% 
IMG OID640081215 
ProductNAD-dependent DNA ligase N-terminus 
Protein accessionYP_001011837 
Protein GI123966756 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.303288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTCGT TATTAGAAAA AAATGTTAAA CATCTTGATG AACAATATAG AATAGGCAAC 
GCTCTAATAT CAGATAAAGC TTTTGATCAA CTTGAAAAAA ACTTACTCCG AACAGATCCA
CAATGTGATT ACTTTAATCA AAAAAATAAT TTATTACTTC CCTCATTGGC TAATGAAAAC
CATATAGAGT TTTTAGCGAG CTTGTTAAAA AACACAAGAT TGAGCATTCA ACCAAAAATT
GATGGATGTG CTATTGCAAT TAATTATATA AATGGCAAGT TTAATAAAGC CATTACAAGA
ACAGGATTTG ATGTCACAAG CAAAATTAAA AAGATTAAAG ATGTCCCCAG TCGCCTTCCT
ATCCAACGAG ATTTTCAAGT TAGAGGTGAG CTTTACTCCC CAAACCAAAC TCCCTATTTT
TCCCAAAAAA TTACAAGCGA ATTCCTCAAC AATAAAAAAA GGATTGCAAA AAGTTTCAGC
TTTTGCTGTT TCCAAATACT TAATGGAAGA CTTAACCAGT ATGAAACCCT TAACTATCTT
AAAAAATGTG GCTTTAACAC CCCTCACAGT TACTTCACTA ATTTTACAAG CCAAGTCGAG
TTATTTAGAA AAAGATGGTT AGATGGAAAA ATTTTTTCAA AATACCCAAC TGATGGAATT
GTCATCAAAA TAAATAGTAG AAAATTGCAG TTGCTTAGAG AAACAAATCT TTCAAAATAT
AATGAATGGC AATATGCAAT TAAAAAATAA
 
Protein sequence
MGSLLEKNVK HLDEQYRIGN ALISDKAFDQ LEKNLLRTDP QCDYFNQKNN LLLPSLANEN 
HIEFLASLLK NTRLSIQPKI DGCAIAINYI NGKFNKAITR TGFDVTSKIK KIKDVPSRLP
IQRDFQVRGE LYSPNQTPYF SQKITSEFLN NKKRIAKSFS FCCFQILNGR LNQYETLNYL
KKCGFNTPHS YFTNFTSQVE LFRKRWLDGK IFSKYPTDGI VIKINSRKLQ LLRETNLSKY
NEWQYAIKK