Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_14711 |
Symbol | panB |
ID | 4720119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 1308670 |
End bp | 1309443 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640081161 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001011785 |
Protein GI | 123966704 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCCAT CAGAACTCGT TAAATATAAA AAAAATTCTC AAAAAATCAT TGCATTAACT GCTTGGGACT CCATATCAGG TTCTCTAGCT GAGCAATCAG GAGCAGATAT TGTTCTAGTA GGAGACTCTT TAGCAATGGT GTGTTTAGGA TACAAATCCA CATTACCAGT AACTTTAGAG AATATGATTT ATCACACAAA TGCAGTTTCA AGAGGGTTCA GCAGAGAAAT AGAAGAACAT TCCTTATTAG TTTGTGATAT GCCTTTTCTA ACTTATCAAT GCGGAGAAGA TAAGGCAGTG GAATATGCCG GGAAAATAAT TAAGAACACC TATGCAAAGG CAGTAAAAAT TGAAGGTGCT GAACCAGAGG TCCAAACTGT TATTTCAAGG CTAATAAGAA TGGGGATTCC TGTCATGGGG CATTTAGGAC TTACACCACA GAGTTATTTA AATCTAGGAT TAAAAAAACA AGGGCTCAAG AAAGAAAGTT ACGAAAAAAT CAAAAGAGAT GCTTTATCAC TAGAAAAATT GGGATGCTTT TCTATAGTTT TGGAGCATAT TCCGGAATTA CTTGCTAAAG AAATTCAAAC CGATTTAGAA ATACCGACAA TAGGAATAGG TGCAGGCGTC TTTTGTGATG GTCAGGTAAG AGTTACGGCT GATTTATTAG GCCTAAGTGA TAAGCAGCCT CCATTTTGTA AACCAATTGT TGATGGGAAA AAATATTTTG GTGAAAAACT TAAAGAGTGG GTAACTTCTG AAAGGCTTAG TTAA
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Protein sequence | MLPSELVKYK KNSQKIIALT AWDSISGSLA EQSGADIVLV GDSLAMVCLG YKSTLPVTLE NMIYHTNAVS RGFSREIEEH SLLVCDMPFL TYQCGEDKAV EYAGKIIKNT YAKAVKIEGA EPEVQTVISR LIRMGIPVMG HLGLTPQSYL NLGLKKQGLK KESYEKIKRD ALSLEKLGCF SIVLEHIPEL LAKEIQTDLE IPTIGIGAGV FCDGQVRVTA DLLGLSDKQP PFCKPIVDGK KYFGEKLKEW VTSERLS
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