Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_11791 |
Symbol | clpC |
ID | 4719000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1034484 |
End bp | 1037015 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640080861 |
Product | ClpC |
Protein accession | YP_001011493 |
Protein GI | 123966412 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGAAA GATTTACAGA AAAAGCCATA AAAGTCATTA TGCTTGCCCA AGAGGAAGCT AGAAGGCTTG GACATAATTT TGTTGGAACA GAACAAATAT TACTAGGCTT AATTGGTGAA GGTACTGGCG TTGCAGCTAA GGTGCTTAAA TCACTAGGAG TAAATCTTAA GGACTCAAGA ATAGAAGTTG AAAAAATTAT AGGAAGAGGT TCGGGTTTCG TTGCAGTTGA GATTCCTTTT ACTCCAAGAG CAAAAAGAGT ATTGGAGTTG TCTCTCGAAG AAGCTCGTCA ATTAGGACAT AACTATATAG GCACCGAACA CCTACTTCTT GGTTTAATCA GGGAAGGCGA AGGTGTGGCT GCAAGAGTTT TAGAAAATCT AGGAATTGAT CTGACAAAAG TCAGAACCCA GGTTATAAGA ATGCTTGGAG AGACCGCTGA CGTTGGTACA GGTGGGACTT CATCAAATAA AGGAAATTTA AAGACAGCAA CTCTCGATGA ATTCGGAACG AATTTAACAA AGCTTGCAAG TGAATCAAAA CTTGATCCAG TTGTCGGACG TTATGAGGAA ATAGATAGAG TTATTCAAAT CTTAGGTAGG AGAACTAAAA ACAATCCTGT GCTTATTGGT GAACCAGGAG TAGGTAAAAC AGCTATAGCA GAAGGTTTAG CTCAAAGAAT TCAACTTGGA GAAATTCCTG ACATACTTGA AGATAAAAGG GTTTTAACCC TTGATATAGG ACTTCTTGTT GCAGGAACAA AATATAGAGG TGAATTTGAA GAGAGATTAA AAAAAATAAT GGAAGAGATC AAATCAGCTG GAAACGTTAT TCTGGTTATT GATGAAGTCC ATACTTTAAT CGGAGCCGGA GCTGCTGAAG GTGCTATCGA TGCCGCTAAC ATATTAAAGC CAGCTTTAGC TAGAGGAGAA CTCCAATGCA TAGGAGCTAC AACTTTGGAT GAATATAGAA AGCATATAGA AAGAGATGCA GCGCTGGAAA GAAGATTCCA ACCGGTGATG GTGGGAGAGC CATCTATTGA AGATACAATC GAAATTTTGA AAGGTTTAAG AGAACGTTAC GAACAACATC ATCGTTTAAA AATTACTGAT GATGCTTTAG AAGCAGCCGC TCATTTAGGT GATCGTTATA TATCGGATAG ATTTTTACCT GATAAGGCCA TTGATCTTAT AGATGAAGCA GGAAGTAGAG TAAGATTAAT AAATTCTAAG CTTCCTCCCG AAGCCAAACA AATTGATAAG GAATTAAGAC AAGTTCAAAA ACAAAAAGAA GAATCAGTAA GAGATCAAAA TTTTGATCAA GCAGGTCAGT TAAGGGAAAA GGAAATTGAA TTGTCTGAAA AAATTAAAGA GCTTTTAGAT AGTAAAAAAG AGAGCTTAGA TAAAAATAAT TCAAGTAATG CTTCGGAAAC TGAAGACGGT GGCATTGATA TTACTCAAAA CCCTCTTGTA AGTGAAGAAG ATGTGGCTCA TATAGTGGCT TCATGGACAG GTGTTCCTGT TCAGAAATTA ACAGAAACCG AGTCAGTCAA ACTCCTTAAT ATGGAAGAGA CATTGCATCA AAGACTTATA GGCCAAGATG AGGCTGTAAA AGCAGTATCA AAAGCCATTA GAAGAGCTAG GGTCGGTTTG AAAAATCCTA ATAGACCAAT CGCAAGCTTT ATTTTTTCAG GCCCTACTGG TGTTGGGAAA ACTGAATTAA CTAAATCATT AGCATCATAT TTCTTTGGTA GTGAGGAAGC TATGATTAGA TTAGATATGT CTGAATTTAT GGAAAGACAT ACTGTTAGTA AGTTAATCGG TTCCCCTCCC GGATATGTTG GTTTCAACGA AGGGGGTCAA CTTACAGAGG CTGTAAGAAG AAGACCATAC ACTGTAGTTT TATTCGATGA AGTGGAGAAA GCTCATCCAG ATGTTTTTAA TTTGTTATTA CAACTTCTTG AAGATGGTAG ATTAACAGAC TCAAAGGGTA GAACAGTTGA TTTTAAAAAT ACGCTTTTAA TAATGACTTC TAATATTGGC TCTAAAGTTA TCGAGAAAGG TGGCGGTGGT TTAGGTTTTG AATTTTCCGG CGATTCCGTT GAAGATAGCC AATACAATAG GATCAAATCT CTTGTAAACG AGGAACTAAA ACAATACTTT AGACCTGAGT TTTTAAACAG ACTTGACGAG ATAATTGTAT TCAGACAATT AACTAAAAAC GAAGTTAAAG ACATCGCAGA AATAATGTTA AAAGAAGTAT TCTCTCGATT AAATGAAAAG GGTATAAAAT TAGATGTTAC TGAAGCATTT AAAGAAAGAC TTGTTGAAGA GGGATATAAT CCAGCCTATG GAGCAAGACC TTTAAGAAGA GCAGTCATGC GCTTATTAGA AGATAGTTTG GCTGAAGAAG TTTTATCAGG AAGAATTAAA GATGGAGACA AAGCTTTAGT CGATATTGAT GAAAATAAGA AAGTTACAGT AAATATTTCC TCAGAAGAAT CTTCTCAAGA ATTAGCAGGA GCTAATTTTT AA
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Protein sequence | MFERFTEKAI KVIMLAQEEA RRLGHNFVGT EQILLGLIGE GTGVAAKVLK SLGVNLKDSR IEVEKIIGRG SGFVAVEIPF TPRAKRVLEL SLEEARQLGH NYIGTEHLLL GLIREGEGVA ARVLENLGID LTKVRTQVIR MLGETADVGT GGTSSNKGNL KTATLDEFGT NLTKLASESK LDPVVGRYEE IDRVIQILGR RTKNNPVLIG EPGVGKTAIA EGLAQRIQLG EIPDILEDKR VLTLDIGLLV AGTKYRGEFE ERLKKIMEEI KSAGNVILVI DEVHTLIGAG AAEGAIDAAN ILKPALARGE LQCIGATTLD EYRKHIERDA ALERRFQPVM VGEPSIEDTI EILKGLRERY EQHHRLKITD DALEAAAHLG DRYISDRFLP DKAIDLIDEA GSRVRLINSK LPPEAKQIDK ELRQVQKQKE ESVRDQNFDQ AGQLREKEIE LSEKIKELLD SKKESLDKNN SSNASETEDG GIDITQNPLV SEEDVAHIVA SWTGVPVQKL TETESVKLLN MEETLHQRLI GQDEAVKAVS KAIRRARVGL KNPNRPIASF IFSGPTGVGK TELTKSLASY FFGSEEAMIR LDMSEFMERH TVSKLIGSPP GYVGFNEGGQ LTEAVRRRPY TVVLFDEVEK AHPDVFNLLL QLLEDGRLTD SKGRTVDFKN TLLIMTSNIG SKVIEKGGGG LGFEFSGDSV EDSQYNRIKS LVNEELKQYF RPEFLNRLDE IIVFRQLTKN EVKDIAEIML KEVFSRLNEK GIKLDVTEAF KERLVEEGYN PAYGARPLRR AVMRLLEDSL AEEVLSGRIK DGDKALVDID ENKKVTVNIS SEESSQELAG ANF
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