| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_10201 |
|---|
| Symbol | umuC |
|---|
| ID | 4719168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | + |
|---|
| Start bp | 911430 |
|---|
| End bp | 912722 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640080700 |
|---|
| Product | putative UmuC protein |
|---|
| Protein accession | YP_001011334 |
|---|
| Protein GI | 123966253 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.31245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCA AAAGCTCAAT TACTGAAGCA ATAGCTCTCA TAGATGCTAA TAATTTTTAC
GCATCATGCG AACAAAGTAT TAATCCACAT TTAAGGAATA AACCAGTAGT AATCCTATCT
AATAATGATG GATGCATTAT CGCAAGAAGT CCTGAAGCTC GTGCTTTGAG AATCAAAATG
GGAATTCCTT ATTTTAAAGT AAAAAAAAAA TTGAATAGCT TAGGAGTAGC AGTTTTAAGT
TCAAATTACT CTCTCTATGG AGATATGAGC AAGAGATTAA TGAATTTATT AAAGGATTAT
TCTGAAGAGA TCGAGATTTA CTCTATAGAT GAAGCCTTTG TCTCAATTCT GAGACCTAAA
GATAAAAATT TAAATCCTTG GGCAAGAAAA GTAAGGTGCT TAATATATCA AAATTTAGGA
ATAACTTTAA CAATCGGAAT AGCAGAAAAC AAAGTAAGAG CAAAAATTGC TAATAAACTA
GCTAAGAATA TAGATTCTTC AGCAGGAATA TTTGATTTAG TCAGAATCCA TGATGAGACT
AATTACTTAA GAAAAATTAG TGTGGGAAAG GTATGGGGTG TCGGGAAACA AACATCTAAT
TGGTTACAGA GCAAAGGGAT TAAAAATGTC AATGAATTAA GAGATATGGA TGAAAATGAA
ATCATTAAGA AATTAGGTAT TATCGGGAAA AGATTACAAC TTGAATTAAG AGGAGAGAAA
TGTCTTCCGA TAGAAACAAG TAAGAAGCCA AAGAAAGAGA TTCAAGTAAG TAGAAGCTTT
GGTAAGCCAA TTACAAAATT AGAAGATTTG ACTCAAGCAT TAGCAATTTA TGCAATAAAG
GCATCCGAGA AAATGAGAAA TCAAAATTTA AAATCATCTA CCATTACTAT ATTTACAAGA
ACTAGTCATT ATTCAAATCA TGCTTATCAA AAAAGTGCTT ATAAAAAACT TATCAATGCA
ACAGATAACA CAAGTACTAT TTTAAAAATA GTAGTTGAAT TATCTAAAGA GATTTATACG
CCGGGATATA AATTATCTAA AGCTGGAGTT TTAATGCAGG ATTTAACTAA TTGCAAATAT
TTACAAAAAT CAATTATCAA TAATGAATTT CAAGAAGACT CAAAAAAAAC TATACGACTT
ATGAAAACAA TTGACTCCTT GAATAAAAGA TATAATAATG AAGTAATTAC TTGGGCAATT
GCAAAAAAAC AACAAGTATG GGCAATGAAT AGAAATTCAT TAAGTTCCGG ATCTACAACA
GATATTAAAA AAATTCCAAA TATAATTAAA TAA
|
|---|
| Protein sequence | MKSKSSITEA IALIDANNFY ASCEQSINPH LRNKPVVILS NNDGCIIARS PEARALRIKM
GIPYFKVKKK LNSLGVAVLS SNYSLYGDMS KRLMNLLKDY SEEIEIYSID EAFVSILRPK
DKNLNPWARK VRCLIYQNLG ITLTIGIAEN KVRAKIANKL AKNIDSSAGI FDLVRIHDET
NYLRKISVGK VWGVGKQTSN WLQSKGIKNV NELRDMDENE IIKKLGIIGK RLQLELRGEK
CLPIETSKKP KKEIQVSRSF GKPITKLEDL TQALAIYAIK ASEKMRNQNL KSSTITIFTR
TSHYSNHAYQ KSAYKKLINA TDNTSTILKI VVELSKEIYT PGYKLSKAGV LMQDLTNCKY
LQKSIINNEF QEDSKKTIRL MKTIDSLNKR YNNEVITWAI AKKQQVWAMN RNSLSSGSTT
DIKKIPNIIK
|
|---|
| |