Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_09751 |
Symbol | ribB |
ID | 4719208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 871661 |
End bp | 873394 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640080654 |
Product | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein |
Protein accession | YP_001011289 |
Protein GI | 123966208 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA CAAGTCCCAA ATCAAATAAT GGAACAATTT TGGATAATAA TGAAAAGTTT AAAATAGAAT TTGATCAGAT AAGCGATGCA TTAGCTGCTA TAAGGAATGG AGAATGCATC ATTGTAGTTG ATGATGAAAG AAGAGAAAAT GAAGGAGATT TAATTTGCGC TGCTCAGTTT GCAACTCCTC AACAAATTAA CTTTATGGCA ACTGAAGGAA GAGGACTTAT ATGCTTAGCA ATGCAAGGAG ATAAATTAGA TGCATTAGAT CTTCCTTTAA TGGTTGATCG AAATACTGAT AAGAATCAAA CTGCCTTTAC TGTATCAATA GATGCTGGGC CAGAGAATAA TGTAACTACA GGCATATCAG CAGAGGATAG AGCTAAAACT ATACAAGTAG CAATAAATCC TTCAACGAAA CCTGAAGATT TAAGAAGACC TGGACACATA TTTCCACTTA GAGCAAAAAA AGGAGGAGTC CTAAAAAGGG CAGGACATAC CGAGGCTGCT GTTGACATTG CGGCAATGTC TGGTCTATAT CCTGCTGGTG TTATTTGCGA AATCCAAAAT CCGGATGGCT CTATGTCTCG ACTGCCTCAA CTTAAGGAAT ATGCTAAAGA ATGGGGAATG AAGTTAATAT CTATTGCAGA CCTTATTAGT TATAGATTTC AAAACGAAAG ATTTGTTTAT AGAAAATCAG AGACAATTCT TCCAAGTATT TTTGGTAATT TCAAAGCATA TGGATACATA AATGATCTTG ACGGCTCTGA ACATATTGCA TTAGTAAAGC AAAAATCAAA TAAATTAAGT GAACCAGTTT TAGTAAGGAT GCATTCAGAA TGTTTAACAG GAGATGCTTT TGGCTCACTA CGATGTGACT GCAGACCTCA GCTTGAAGCG GCATTATCTA GGATAGAAAA AGAAGGCGAG GGAGTAGTTG TTTATTTAAG ACAAGAAGGA AGAGGGATCG GTTTGATTAA TAAATTAAAA GCATACAGCC TACAAGATGG AGGTTTGGAT ACTGTGGAAG CAAATGAAAA ATTAGGTTTT CCCGCTGACC TCAGGAATTA TGGAGTTGGA GCTCAAATAT TAACTGACTT AGGTATCAAA AAATTAAAAC TACTAACTAA TAATCCTAGG AAAATTGCAG GATTAGGTGG TTATGGAATA GAGGTTACTG AGAGAGTTCC ACTAGTCATA TGTCCTGGAG ATCATAATGC TGAATATTTA AATGTAAAAA GACAAAAACT TGGTCACTTA TTAGAAGAAG ATAAAATAAA TTCTAGATTT GTGGACCCAT ATATTGCTAT TTTCTTAGAT GGTGATTACA AATCGATTGA TTTAGTTCCT ATCAAAAATA AAACATTTGA ATTCTGTACC AAAAAAAATA TAAATATTAT GTTAGAGAGT TCTCCAAGAT TATTAGCTTT TTGGAATAGA CCAAAATTAG TATGGAGAAT ATTACATGAT AAAAACAGAG AAGATTTCAC AATAAACGAT AATGAAATTA AAAATATAGA AATTTTTATT AAGTTTTTAT CTGAATTTGA TAAAAGCTCG AAAGTTGGTA TTATCGTCTC CAAAAATATC GAGCAGGCGT TACATCCGAA AAATAACATT AAATTGAAAA ATACAAAGTT TTCAATAAAA AATGATTATT TATATTCCTC TACTAGAAAA TTTAATCTTG ATAAAGAAAC TTTTAGTATT ATATTTAATA AAGATTTAGC TTAG
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Protein sequence | MKETSPKSNN GTILDNNEKF KIEFDQISDA LAAIRNGECI IVVDDERREN EGDLICAAQF ATPQQINFMA TEGRGLICLA MQGDKLDALD LPLMVDRNTD KNQTAFTVSI DAGPENNVTT GISAEDRAKT IQVAINPSTK PEDLRRPGHI FPLRAKKGGV LKRAGHTEAA VDIAAMSGLY PAGVICEIQN PDGSMSRLPQ LKEYAKEWGM KLISIADLIS YRFQNERFVY RKSETILPSI FGNFKAYGYI NDLDGSEHIA LVKQKSNKLS EPVLVRMHSE CLTGDAFGSL RCDCRPQLEA ALSRIEKEGE GVVVYLRQEG RGIGLINKLK AYSLQDGGLD TVEANEKLGF PADLRNYGVG AQILTDLGIK KLKLLTNNPR KIAGLGGYGI EVTERVPLVI CPGDHNAEYL NVKRQKLGHL LEEDKINSRF VDPYIAIFLD GDYKSIDLVP IKNKTFEFCT KKNINIMLES SPRLLAFWNR PKLVWRILHD KNREDFTIND NEIKNIEIFI KFLSEFDKSS KVGIIVSKNI EQALHPKNNI KLKNTKFSIK NDYLYSSTRK FNLDKETFSI IFNKDLA
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