Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_09331 |
Symbol | ahpC |
ID | 4719240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 833665 |
End bp | 834249 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640080611 |
Product | thioredoxin peroxidase |
Protein accession | YP_001011247 |
Protein GI | 123966166 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0438546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTTAA GAGTTGGCCA AGAAGCACCA AATTTCACTG CAACAGCAGT TTATGATCAA GAATTTAAAG AGATAACTCT TTCAAGTTAC AAAGGTAAGT GGGTTGTTTT ATTCTTCTAT CCACTAGATT TTACATTTGT ATGTCCAACT GAAATTACTG CCTTTAGTGA TGAATACGAA AAATTTTCTG CATTAAATAC CGAAATACTC GGAGTATCCG TAGATAGTAA GCATTGTCAT TTAGCATGGA TACAAACACC AAGAAATGAA GGTGGTATTG GTGATATTAA TTATCCATTA GTTTCAGATT TAAAACGAGA AATTTGCCAA GAATACAATG TTCTTAATGA TGATGGAGAA GCAGATAGGG GTTTATTCCT TATTAATCCG CAAGGAATAG TAATGCATAC CACAGTAAAT AAAGCACCTG TAGGACGTAA TGTAGACGAA ACGTTAAGGA TACTTCAAGG CTACCAATAT GTTGCAGCTA ATCCTGATGA GGTCTGTCCC GCAAACTGGA CTCCAGGAGA AAAAACAATG TTAGAAGATC CAAAAGGAAG TAAAGAATAC TTTTCTGCAC TCTAG
|
Protein sequence | MSLRVGQEAP NFTATAVYDQ EFKEITLSSY KGKWVVLFFY PLDFTFVCPT EITAFSDEYE KFSALNTEIL GVSVDSKHCH LAWIQTPRNE GGIGDINYPL VSDLKREICQ EYNVLNDDGE ADRGLFLINP QGIVMHTTVN KAPVGRNVDE TLRILQGYQY VAANPDEVCP ANWTPGEKTM LEDPKGSKEY FSAL
|
| |