Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_07471 |
Symbol | aspC |
ID | 4719499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 675975 |
End bp | 677156 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640080426 |
Product | aminotransferases class-I |
Protein accession | YP_001011063 |
Protein GI | 123965982 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.503554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAG TAAATTTATC AAAAAGAGCT CTCTCACTTG AACCTTCACT TACTCTCCAG ATAAGTGCTA AAGCTAAAAA ACTTTCAGAA GAGGGGAAAG ATATCTGTAA TTTAAGTGCT GGAGAACCAG ATTTTGATGC TCCAAAAGAA ATCTTAAATG CCACAAGTCA GGCTATATTC GATGGACATA CAAAATATGG TCCTGCCGCA GGGGATAAAG AACTTAGAAA AGCTATTGCA AAAAAATTGC AGATTCAAAA CAATTTAAAT GTTGAATTTG AAAATGTAAT GGTAACAAAT GGAGCAAAGC AGGCAATTTA TAATCTTTTC CAGGTTTTAT TGAATGATGG TGACGAAGTG ATAATACCTG CTCCATATTG GCTAAGCTAT CCACAAATGG TTAGATTGGC GGGTGGAAAA CCTATCTTCC TAAATTCAGC CCCTGAAGAT GGATTCAAAA TTAATATACA AGATTTAAGA TCTAAAATTT CCTCAAAAAC TAAATTTATT ATAATTAATT CTCCCAATAA CCCAACTGGC AGAATAATGG CAAAAGAAGA GTTATTACAA ATTGCGGAAG TAGTAAGAGA GCATAAAAAT ATTAATGTTC TTTCAGATGA GATTTACGAA TTAATTCTTA AAAAAGAATT TCGTCATTTA AGTTTAGCTT CATTAGCTAC TGATTTAAAA GAAAGAATTT TTATTATTAA TGGTTTTGCA AAAGGGTGGG CGATGACTGG CTGGAGAGTA GGTTATTTAG TAGGAAAAAA AGAGGTTATT AAAGCTTCAT CCGCTTTACA AAGTCAAAGC ACAAGTAATG TTTGTTCTTT CGTTCAAAGA GGAGCTTTAG AAGCTTTAAA GATAAATCAA GAATTTTTCT TAAAAATCAA TAGTCATTAT GATCTCAGAA GAGAAATACT TTATGAAGGC CTTAGAAATA TTGAAGGTTT AGTTGTTCAT CAACCTAATG GAGCTTTTTA CGCATTTCCT AGATTACCTA ATAAATCTAT AAGTTCTGTT GATTTTTGCA AAAAAATCTT AAATGATTAT GGATTAGTAA TAGTACCCGG GAAACCATTT GGAGATAATC AAAGCTTTAG AATATCTTGT GCAACATCAA AAGAAAAAAT TATTGACGGA TTATCAAGGT TAAAAAAAGC GGTTCATAAT TATTATTTTT AG
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Protein sequence | MSEVNLSKRA LSLEPSLTLQ ISAKAKKLSE EGKDICNLSA GEPDFDAPKE ILNATSQAIF DGHTKYGPAA GDKELRKAIA KKLQIQNNLN VEFENVMVTN GAKQAIYNLF QVLLNDGDEV IIPAPYWLSY PQMVRLAGGK PIFLNSAPED GFKINIQDLR SKISSKTKFI IINSPNNPTG RIMAKEELLQ IAEVVREHKN INVLSDEIYE LILKKEFRHL SLASLATDLK ERIFIINGFA KGWAMTGWRV GYLVGKKEVI KASSALQSQS TSNVCSFVQR GALEALKINQ EFFLKINSHY DLRREILYEG LRNIEGLVVH QPNGAFYAFP RLPNKSISSV DFCKKILNDY GLVIVPGKPF GDNQSFRISC ATSKEKIIDG LSRLKKAVHN YYF
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