Gene P9515_06321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_06321 
Symbolecm27 
ID4719640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp566283 
End bp567362 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content31% 
IMG OID640080309 
ProductCaCA family sodium/calcium exchanger 
Protein accessionYP_001010948 
Protein GI123965867 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAT TTATATTGCC AATAATGGAG ATATTAATAG GAATAATATT ACTTTTTGCC 
GGTGGAGAAT TATTCATTCA AGGGGCGATT TCTTTATCCT TAATTTTAGG TATACCTCAA 
ATTGTAATAG GTTTAACTGT TGTTTCTTTA GGGACAAGTT CTCCTGAATT ATTAGTAAGT 
TTAAATTCAA TCTTCAAAGG GAGTGACTCT CTAGCAGCAA GTAATGTAAT TGGAAGCAAT 
ATTTTTAATG TTCTTGTTGT ATTAGGAATA AGCTCATTGA TAACACCTTT AAAAGTAAAA 
AGCAGAATTG TAAGAAGAGA TGTCCCTCTT CTAATAGCTA TTTCATGTGC AGTTTGGGCA 
ATGTCATCAA CAGGTCTATT AACTTGGCAG GCAGGGATTT TTTTAATATT TTGTTTAACT 
TTAAATACAA TTTGGGAAAT AAATACAATA CAAGAGAATG AAGAGGAGAC AAAAAAGGCT 
GAGCCTGAGA TTGAGGAATC TCAAGGAAGA GAGAGAAGCA AATTCAACAT TATTTTTAAA 
TTGATATCTG GAATTCTTCT TCTAAGTTTT GGTTCAAATA CTTTAGTAAA TGGTTCTCAA 
TCTTTAGCAA CTCTATTAGG CGTAAATGAA ATAATTATTG GTCTCACGAT AGTTGCTACG 
GGAACCTCAC TGCCTGAACT CGTTACTTCC ATAATTGCAG CATTAAAAGG TAAAACAGAT 
CTTGCTATTG GTAACGTCAT TGGAAGTAAT TTACTCAATC AGCTTCTTAT ACTGGGAAGT 
TGCAGTATTT TTTCCGGATT AAAAGGTCTA ACAATTGATC AAAGCCTTAT AAAAGTTGAC 
CTACCATTCA TGGTTTTGAC TACTTTTGCG TGCCTTCCAA TTTTTTGGAC AAAAGGTAAG 
ATTTCTAGAA TTGAAGGCTT TATACTTTTG AATCTTTATA TTTTTTACAT CATGGATAAG 
TTATTGTTCT TGAAAGAATT TAACAATCTC TATCAATTGA GGGTGTGTAT TTTTATTTAT 
TTTTCTTTAT TCACAGTATA TCTTTTTACA CAAGAAAAGT TAAAAACATC TAGAAGATAA
 
Protein sequence
MSEFILPIME ILIGIILLFA GGELFIQGAI SLSLILGIPQ IVIGLTVVSL GTSSPELLVS 
LNSIFKGSDS LAASNVIGSN IFNVLVVLGI SSLITPLKVK SRIVRRDVPL LIAISCAVWA 
MSSTGLLTWQ AGIFLIFCLT LNTIWEINTI QENEEETKKA EPEIEESQGR ERSKFNIIFK 
LISGILLLSF GSNTLVNGSQ SLATLLGVNE IIIGLTIVAT GTSLPELVTS IIAALKGKTD 
LAIGNVIGSN LLNQLLILGS CSIFSGLKGL TIDQSLIKVD LPFMVLTTFA CLPIFWTKGK 
ISRIEGFILL NLYIFYIMDK LLFLKEFNNL YQLRVCIFIY FSLFTVYLFT QEKLKTSRR