Gene P9515_05461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_05461 
SymbolhflC 
ID4719764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp486239 
End bp487045 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content37% 
IMG OID640080223 
ProductBand 7 protein 
Protein accessionYP_001010862 
Protein GI123965781 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.178963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACAT CTTTTAAGAA TGTCACTCCA ACGGGGCCCG GAGGGACAGC AACACTATTA 
ATTGTTTTAT CTTTTACTGG ATTCCTTTTA CTTACTCAAT CTTTATTTGT AGTGCCTTCT
GGACAAGTTG CCGTTGTAAC TACCCTTGGA AAAGTTAGTG GAGGTTCAAG AAGAGCTGGA
TTAAACTTTA AAGTCCCCTT CGTTCAGTCC GTCTTCCCCT TTGATATAAA AACTCAAGTA
CAACCTGAGA AGTTTGAAAC CTTAACAAAA GATCTTCAAG TTATTAGAGC AACAGCGACT
GTCAAATATT CGGTTAAGCC AAATGAAGCA GGAAGGATTT TTGCAACAAT TGCAAGTAGA
AACAGTGATG TTTATCAAAA AATAGTTCAG CCTTCTCTAC TTAAAGCATT GAAATCTGTT
TTTTCACAGT ATGAATTAGA AACAATAGCA ACTGAATTTA ATGTTATTTC TGAAAGGGTT
GCTGATACCG TTGCTGAGGA ATTGAACTCT TTTGATTACG TAGATGTTAA AAGCTTAGAT
CTTACTGGGT TAGAAATAGC TGAGGAATAC AGAGCGGCGA TTGAACAGAA ACAAATTGCG
GGACAGCTTC TTTTAAGAGC TAAAACAGAA GTAGAAATTG CAGAACAGGA AGCCTTGAGA
TACGAGACCT TAAATAAAGG CCTAAATGAT CAGGTTTTAT TTAAACTATT CCTTGATAAA
TGGGACGGTA GCACACAAGT AGTTCCCGGA CTTCCTGGAA CTAATGGAGG AACTCCACCT
GTAATAGTTG GAGGAAATAA TAGATAA
 
Protein sequence
MSTSFKNVTP TGPGGTATLL IVLSFTGFLL LTQSLFVVPS GQVAVVTTLG KVSGGSRRAG 
LNFKVPFVQS VFPFDIKTQV QPEKFETLTK DLQVIRATAT VKYSVKPNEA GRIFATIASR
NSDVYQKIVQ PSLLKALKSV FSQYELETIA TEFNVISERV ADTVAEELNS FDYVDVKSLD
LTGLEIAEEY RAAIEQKQIA GQLLLRAKTE VEIAEQEALR YETLNKGLND QVLFKLFLDK
WDGSTQVVPG LPGTNGGTPP VIVGGNNR