Gene P9515_04621 details

Gene Information

• Locus tag: P9515_04621
• Symbol: lrtA
• ID: 4719286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: -
• Start bp: 410421
• End bp: 411005
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 640080137
• Product: light repressed protein A-like protein
• Protein accession: YP_001010778
• Protein GI: 123965697
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1544] Ribosome-associated protein Y (PSrp-1)
• TIGRFAM ID: [TIGR00741] ribosomal subunit interface protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.656438
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTT TAATCCACGG GAAGAATATT GAACTTACAG GTGCATTGAA AGAATATACC 
GAGGCAAAGA TAGAAAAAGC AACTCATCAC TACAAGGATA TCGTTAAAGA AGCAGATATA 
CATCTTTCAA TCGAAAAGAA TCCAAGACTT TCATACCAAA CAGCTGAAGT TACAATTTTT 
GCTAGTGGTA CCATTATTAG AGCTGAAGAA AAAACAGAGA ATCTATATTC TAGTATTGAT 
CTAGTTTCAA ATAAACTTTG TAGAAAATTA CGCAAATATA AAGAAAGACA CTATAAAAAT 
TTAAATTATA ATCTTGAAAA AAATAAACAT TCTTTTACTA ATACAAATGA ACACTTAGAT 
TCTATAGATA AAAATATATT TAATGATAAA AGAGAGGCAA AATTACCTGA ACCATCTATT 
AAAAATAAAT ATTTTGAAAT GATTCCTATT TCTTTGGAAG AGGCTAGAAA ACAACTAGAT 
TTAATAGATC ATGATTTTTA TGTTTTTAGA AATAAGAAAA ATAATGAACT ACAAGTTATC 
TATAAAAGAA AACATGGTGG TTATGGTTTA ATCCAGTCTA AATAA 

 

Protein sequence

MKILIHGKNI ELTGALKEYT EAKIEKATHH YKDIVKEADI HLSIEKNPRL SYQTAEVTIF 
ASGTIIRAEE KTENLYSSID LVSNKLCRKL RKYKERHYKN LNYNLEKNKH SFTNTNEHLD 
SIDKNIFNDK REAKLPEPSI KNKYFEMIPI SLEEARKQLD LIDHDFYVFR NKKNNELQVI 
YKRKHGGYGL IQSK