| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_02181 |
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| Symbol | trmE |
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| ID | 4720354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 198356 |
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| End bp | 199741 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640079881 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001010534 |
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| Protein GI | 123965453 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCAA TTGTCGATAC TGAAGATACA ATAGCAGCAA TAGCTTCGGC TATAAGTCTA
GGTAAAGGAG GAATTGCAGT TATAAGAGTA ACAGGGGAAG AAGCAATAAA TTCCTGTAAA
AATATCGTCG AAACAAAATC TAAATATGCT TGGGAGTCTC ATAGAGTTTT TCATGGCTAC
GTTAAAGATA ATTTAGAAAA TAAATATATA GACGAAATTT TAATTTCAGT AATGCATTCT
CCTAATAGTT TCACAGGAGA AGATGTTGTT GAGTTACATT GTCATGGGGG AGTAATTGTT
GTGAATAAAG TAATGGATAC ATTATTATCA AACAATAATA AAGTGAGGAT TGCGAATCCA
GGAGAATTTA GTCAAAGAGC TTTTCTTAAC GGCAAAATAG ATTTAACTCA AGCAGAATCA
ATTAATCAAT TAATTAATGC AAAAAATCTT AAATCAGCAG AGATAGCTTT TAATGGAGTA
AAGGGGGAAA TCAAGAAAAA GATTGATGTT ATTAAAAATG ATTTAATCGA ACAATTATCA
GAAATAGAAG CAAGAGTCGA TTTTGAAGAG GATTTTTCAG ATTTTAATTA TCATGATTTT
TCTAGGAGTA TTAAAAATAT AAAAGAAAAA ATAGAAATTC TTATCGAAAA TACAAAAAGG
GGGGCATCAA TTCATAATGG GATATCGATT GCTCTTATAG GCAAAACCAA TGTTGGGAAA
AGTTCTCTTT TAAATCTTCT CTCAAAAAAA GAAAAAGCTA TAGTTACTAA TATCCCAGGA
ACAACTAGAG ATATGATTGA AGTCAATTTG ACCATTAAAG ATATCCCAAT AAAATTAGTA
GATACCGCTG GGATTAGAGA CACAGATGAA TATATAGAAA ATATTGGAAT AGAGAAAACC
TTTGAAATGA TTCAAAAATC AGATTATATT ATTTATTTAT ACAGCCTAGA AGATGGATTT
AATAAAGATG ATGAGGAAAT TATAAGCAAA ATTCCACGAG AAAAATTAAT AACTATTTTG
GGAAATAAAA AAGATTTAAT TGATTCAAAA AAAAATGATC AAAAAACTTT TTCATCAGAC
ATCGTTTTAA TGAGTATCAA AAATAATGAA GGTGAAAAAG ATTTAGTCGA CAAAATAGTT
AAAAAATGTG GATCAAAAGA ATTTGAAAAT ATAGATATAT TTTTAAATGA AAGACAAATA
TCAAACCTGA GGGATTGCCT AAAAAATTTA AATGATACTG ATCCAATAAT TGCTAATCAA
TTACCTTTCG ATTTATTATC GATTGAAGTT AGAGATGGGA TAAAAAACTT ATCTAGAATT
ACAGGTCAAG AATTAACTGA AGATCTACTA AATAATATTT TTTCTAAATT TTGCATAGGT
AAATAA
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| Protein sequence | MESIVDTEDT IAAIASAISL GKGGIAVIRV TGEEAINSCK NIVETKSKYA WESHRVFHGY
VKDNLENKYI DEILISVMHS PNSFTGEDVV ELHCHGGVIV VNKVMDTLLS NNNKVRIANP
GEFSQRAFLN GKIDLTQAES INQLINAKNL KSAEIAFNGV KGEIKKKIDV IKNDLIEQLS
EIEARVDFEE DFSDFNYHDF SRSIKNIKEK IEILIENTKR GASIHNGISI ALIGKTNVGK
SSLLNLLSKK EKAIVTNIPG TTRDMIEVNL TIKDIPIKLV DTAGIRDTDE YIENIGIEKT
FEMIQKSDYI IYLYSLEDGF NKDDEEIISK IPREKLITIL GNKKDLIDSK KNDQKTFSSD
IVLMSIKNNE GEKDLVDKIV KKCGSKEFEN IDIFLNERQI SNLRDCLKNL NDTDPIIANQ
LPFDLLSIEV RDGIKNLSRI TGQELTEDLL NNIFSKFCIG K
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