| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_01821 |
|---|
| Symbol | csgD |
|---|
| ID | 4720318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | + |
|---|
| Start bp | 168975 |
|---|
| End bp | 169253 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640079845 |
|---|
| Product | LuxR family regulatory protein |
|---|
| Protein accession | YP_001010498 |
|---|
| Protein GI | 123965417 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGG TTGAAGAAGG TATTAACGAC ATTGATATGA TGGGTCTCTC GTCTAGAGAG
ATGGAAATCA TAGATTTAGT GGCTGATGGG CTTACAAATC AAGAAATTGC AGTAAAGCTT
ACTATTAGTA AAAGAACTGT TGATAATCAT GTAAGTAATA TGTTCACCAA AACAGGCTCT
AAAAATAGAG TAGCACTATT AAATTGGGCA ATGGATCACG GAAAAATCTG CAGAGATGGA
TTTAATTGTT GCTCTCTACC TGATTCAGAT CAAGATTAA
|
|---|
| Protein sequence | MQMVEEGIND IDMMGLSSRE MEIIDLVADG LTNQEIAVKL TISKRTVDNH VSNMFTKTGS
KNRVALLNWA MDHGKICRDG FNCCSLPDSD QD
|
|---|
| |