Gene P9303_23031 details

Gene Information

• Locus tag: P9303_23031
• Symbol: rplD
• ID: 4776199
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 2034838
• End bp: 2035473
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640087823
• Product: 50S ribosomal protein L4
• Protein accession: YP_001018303
• Protein GI: 124023996
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTGAAT GTGTTGTTCA CGACTGGCAG GGAAAGGAAG CCGGCAAGGC AAGCCTTGAA 
CTCAAAGTTT CTAAAGAAAC CACGGCTGTT GATCTCATGC ACCGTGCAGT GCTCAGGCAG 
CAGGCCCATA GCCGTCAGGG AACGGCAAGC ACCCTCACCC GTGCCGAGGT TCGTGGTGGT 
GGTCGCAAGC CCTATAAGCA AAAAGGCACC GGCCGTGCCC GCCAGGGAAC GATCCGCACC 
CCCTTACGTC CAGGCGGCGG CATCATCTTC GGACCAAAGC CAAGGACCTA CAACCTGGCG 
ATGAACCGAA AGGAACGTCG TCTGGCCCTA CGCACCGCGC TGATGGCCCG TCTTGAGGAC 
GTCATTGTGG TCAAAGACTT TGGCGACAGC CTCAAGGCGC CGAAGACCCG AGAGATCTCA 
GATGCCCTTG TAAGGCTCGG CGTTGCCGCA GATGCAAAGG TTTTGATCAT TCTTTCCACA 
CCCTCCGAGA TCATCCGACG CTCCGTGCGC AATCTCGAGA AGGTGAAACT GATCGCCGCC 
GATCAACTCA ACGTCTTCGA TTTGCTCCAC GCCAATTCTC TGGTGCTGAG CGAGGAGGCT 
CTCGCCAAGA TCCAGGAGGT TTACGGAGAT GACTGA 

 

Protein sequence

MAECVVHDWQ GKEAGKASLE LKVSKETTAV DLMHRAVLRQ QAHSRQGTAS TLTRAEVRGG 
GRKPYKQKGT GRARQGTIRT PLRPGGGIIF GPKPRTYNLA MNRKERRLAL RTALMARLED 
VIVVKDFGDS LKAPKTREIS DALVRLGVAA DAKVLIILST PSEIIRRSVR NLEKVKLIAA 
DQLNVFDLLH ANSLVLSEEA LAKIQEVYGD D