Gene P9303_22481 details

Gene Information

• Locus tag: P9303_22481
• Symbol: rlpA
• ID: 4778425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: -
• Start bp: 1987450
• End bp: 1988115
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640087765
• Product: rare lipoprotein A
• Protein accession: YP_001018248
• Protein GI: 124023941
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0797] Lipoproteins
• TIGRFAM ID: [TIGR00413] rare lipoprotein A

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGTTGAAG GACGTATTCC TGCTGGGGAT GATTTTTTCT CCTCATTCAA GTGTCGTCTG 
CTACTAATGA AATTTTCCGT TTCGCTTCTT GTTCTTGCTG GTGTTTGCTC CAGCAGTGCT 
GCACTGTTAC CAGCCTTTGC TCGTGATCTT GACCTCGACA AAAAGGTCAC CAGGGAACAG 
GTCAAGAAAG CTCTGCTTGA ACGAATCTCG CTTCTTGCGA CTCCTTTGTC CGCCAATCAA 
GGCAGCTCAG ATCAAGGCAG TGCTGATGTC GCTACTGGTT TAACTGTTGA TTCAGTTGTT 
GAGACACCAC AAGCGTTACC AATCGTTCCA GTTGCAAAGC TCAACCGACC TGTCAAGCCA 
ACTCCCACTG TTGTTCAAGT GAGCACTGGT GAAGCAAGCT GGTACGGCCC GGGCTTCTTC 
GGAAACCGAA CTGCAAGTGG TGAAGTTTTC AGGCCAGGCA CAATGACAGC TGCTCATCGC 
AGCTTGCCTT TTGGTACCAA GGTAAGGGTG ACCAACCTTT GGAATGATCG TTCAGCTGTT 
GTGACAATCA ACGATCGCGG CCCTTTTATC GCTCATCGCG TCATCGATCT TGCTCATGGT 
GCTGCCCATG AGCTTGGTTT GATATCGAGT GGTATTGCCC AAGTGCGTCT TGAGGTGCTG 
CGCTGA 

 

Protein sequence

MVEGRIPAGD DFFSSFKCRL LLMKFSVSLL VLAGVCSSSA ALLPAFARDL DLDKKVTREQ 
VKKALLERIS LLATPLSANQ GSSDQGSADV ATGLTVDSVV ETPQALPIVP VAKLNRPVKP 
TPTVVQVSTG EASWYGPGFF GNRTASGEVF RPGTMTAAHR SLPFGTKVRV TNLWNDRSAV 
VTINDRGPFI AHRVIDLAHG AAHELGLISS GIAQVRLEVL R