Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_16761 |
Symbol | typA |
ID | 4775954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 1465224 |
End bp | 1467026 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640087185 |
Product | tyrosine binding protein |
Protein accession | YP_001017685 |
Protein GI | 124023378 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.262859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCC AGGCCAAGGC GATCCGCAAC ATTGCAATTA TCGCTCACGT GGATCACGGC AAAACAACCT TGGTTGATGC CCTGTTGACT CAGTCCGGGA TCTTCCGAGA CAACGAGGCT GTGCCCACAT GTGTCATGGA CTCCAATGAT TTGGAAAGGG AACGGGGCAT TACGATCCTT TCAAAGAACA CGGCCGTTAC CTACGACGAG ACGCGGATCA ACATTGTTGA TACCCCTGGT CATGCCGATT TTGGCGGTGA GGTTGAGCGG GTGCTCGGCA TGGTTGATGG CTGTTTGCTG ATCGTTGACG CCAACGAGGG GCCTATGCCA CAGACGCGTT TCGTGCTCAA GAAGGCGCTT GAGCAGGGAT TGCGGCCGAT TGTGTTCGTA AACAAGATTG ATCGTGCGCG GGTGGATCCT GAAACCGCTG TCAACAAGGT GCTCGATCTG TTTATTGAAC TCGGTGCAGA TGATGACCAA TGTGATTTCC CGTACTTATT CGGCAGTGGA ATGGGAGGTT TTGCCAAGCC GGATATGGCA ACTGAAAGTC AAACAATGAA GCCACTATTT GATGCCATCC TGCGTCATGT TCCACCACCT GTTGGAGATG AGAACAAGCC TCTTCAGCTA CAGATCACTA CTCTCGATTA TTCAGACTTC CTGGGCAGGA TTGTGATTGG TCGGGTCCAT AACGGGGTTA TCCGTAATGG TCAGAGTGCT TCGTTGATTA AGGATGATGG CAGCATTAAA CGTGGCCGGA TTAGCAAACT ACTCGGTTTC GAAGGGTTGC AACGGATTGA GATACAAGAA GCTGGAGCGG GAGATCTCGT TGCTTTGGCC GGTTTCGATC AAGTCAATAT TGGCGAGACC ATTGCCTGTC CAGATGAACC AAAAGCTTTA CCTCTAATCA AGGTGGATGA ACCCACTTTG CAGATGACAT TTGTCGTCAA TGATTCACCC TTTGCTGGCA AAGAAGGCAA ATTCGTCACT AGCCGGCAGC TGCGAGATCG TTTACGCAAG GAATTACTCA CCAATGTTGC CTTACGCGTT GAGGACACTG ATTCTCCTGA TCGTTTTGCG GTTAGCGGGC GTGGTGAACT ACACCTGGGC ATCCTGATTG AAACCATGCG CCGCGAGGGA TTTGAGTTTC AGGTAACCCA GCCTCAGGTG ATCTTCCGAA CGATTGACGG CACTCCTTGC GAGCCCGTTG AAACCTTGGT GATGGATGTA CCAGAGGCAG CCGTTGGCGC CTGCATTGAG AAGTTGGGTG TGCGTCGGGG TGAAATGCAG AACATGGAAA CCGGTAACGA CGGTCGCACC CAGCTTGAAT TTGTTGTTCC TTCTCGGGGG TTGATCGGTT TACGTGGTGA GTTTGTACGT GCTACCAGGG GTGAGGGAAT TATGAGCCAC TCTTTTTTTG AATATCGCCC AATGTTGGGA GAGTTTGATG CTCGTCGGAA TGGTGTTCTG ATTGCTTTTG AACAGGGCAC TGCGACCTTC TACGCACTCA AGAATGCTGA GGGTCGTGGT CAGTTCTTCA TCTCTCCGGG TGTCAAGGTT TATAAGGGGA TGATCGTTGG CGAAAACAAT CGACCTCAGG ATATGGAGTT AAACGTTTGC AAGGCCAAAC AACTCACAAA TATCCGCTCT GCTGGTGCAG AAGAGCTCGA TACCTTGCAG ACACCTGTTC AGATGACCCT TGAACGTGCT CTTGAGTACA TCGGTCCAGA TGAAATGCTT GAGGTCACCC CAGAGTCCAT TCGCTTGCGC AAGTTGCCTG CCAAGAAGAT GGCCAAACGC TGA
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Protein sequence | MSAQAKAIRN IAIIAHVDHG KTTLVDALLT QSGIFRDNEA VPTCVMDSND LERERGITIL SKNTAVTYDE TRINIVDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL EQGLRPIVFV NKIDRARVDP ETAVNKVLDL FIELGADDDQ CDFPYLFGSG MGGFAKPDMA TESQTMKPLF DAILRHVPPP VGDENKPLQL QITTLDYSDF LGRIVIGRVH NGVIRNGQSA SLIKDDGSIK RGRISKLLGF EGLQRIEIQE AGAGDLVALA GFDQVNIGET IACPDEPKAL PLIKVDEPTL QMTFVVNDSP FAGKEGKFVT SRQLRDRLRK ELLTNVALRV EDTDSPDRFA VSGRGELHLG ILIETMRREG FEFQVTQPQV IFRTIDGTPC EPVETLVMDV PEAAVGACIE KLGVRRGEMQ NMETGNDGRT QLEFVVPSRG LIGLRGEFVR ATRGEGIMSH SFFEYRPMLG EFDARRNGVL IAFEQGTATF YALKNAEGRG QFFISPGVKV YKGMIVGENN RPQDMELNVC KAKQLTNIRS AGAEELDTLQ TPVQMTLERA LEYIGPDEML EVTPESIRLR KLPAKKMAKR
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