Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_16711 |
Symbol | sir |
ID | 4776276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 1458756 |
End bp | 1460552 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640087180 |
Product | sulfite reductase subunit beta |
Protein accession | YP_001017680 |
Protein GI | 124023373 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
TIGRFAM ID | [TIGR02042] ferredoxin-sulfite reductase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAAG GGCAGACAAC ATCTGGCCAA GCGGCAGATC TCAAGTTCGC AGCTTGTCTC GCCAGTGGAG CAGACCTGAG CAAATTTGAA CAATTCAAGG CTGACAGCTG CTACTTACTA GACCCCCTGG CTGCTGAACT TGAGAACAGC AGTGATCACT TCAGCAACGA CGCCGTTCAG CTGCTCAAAT TCCACGGAAG CTATCAACAG GACAACCGAG ATAACCGCCA GAAAGGTGAG GGTAAGGATT GGCAAATGAT GCTGCGTCTG CGCAGCCCTG GCGGACGTAT CCCACCATCA CTGTTTTTAG CCTTAGATGA TCTGTCCAAT CGCCTTGGCA ATGGGAGCCT GCGGGCCACT ACCCGCCAGG CGTTCCAGAT TCATGGTGTC CGCAAGGAGG ACCTGCGCGA AGTTATCAGC ACAATCATCC GATCAATGGG ATCAACCCTG GCGGCTTGTG GTGATATCAC TCGCAACGTT ATGGCACCAG CAGCTCCCTA TGAGAAAGGT GGTTATCCAG CTGCTCGACA ACTTGCCAAT GAAATCGCCG ATGTTCTCAG CCCAACGGCA GCGGAGGGCT CCTATCTGGA CCTATGGGTG AATGGAAGTG CGACCTACCG CATCCGCCCC TCCAGGCGAG TGAAAAAAGT TCGTACCCGC CAGCATCAGG GCAACGTCTT CAGTGGAGAT ACCAAGGAAC CTCTATATGG CAAGACCTAT TTGCCGCGCA AATTTAAGTG CGCCGTCACC GTGCCAGGCG ATAACTCAGT TGATCTACTT ACCAATGACA TCGGTCTAGT TGTCTTTACT GCTGCAAACG GTGAAATCAA GGGTTGCAAT GTCTATGTGG GTGGCGGCAT GGGTCGAACC CACAACAATG AACAGACATT CGCCCGTACA GCTGATCCTC TTGGCTATGT GGCGGCAGAG CATGTATTGG ATTTGGTGCA GTCGATTTTG GCCTTGCAAC GCGACTACGG AGACCGAAAG ACAAGGCGTC ATGCCCGCAT GAAATATCTT CTCAATGATC AGGGGATCAG CTGGTTTAAA CAGGAACTCA AGAGCAAATA CTTCCTTCAT CCAATCAAAG CGTTAAGGCC TGAACCAAAG AGCAAACTTG AGGACTATCT GGGCTGGCAT CAGCAAAGCG TTGGCCAATG GTTTGTTGGT TTGCCACTGC TCTCTGGACG CTTGGAAGGA GATCTCAAGA AAGGACTCCG CCAACTGGTG GAGACCTTTC AACTTGAAAT CCGCCTAACA CCGAATCAGG ATCTACTGCT CTGCAATATC GGGACGTCAC AACGGTCCAG TGTTCGCAAA GGTCTAGCCG CTCTAGGCAT CCGCGCCCCA GAGGCTCCGG CGATGCTGGC ACGGCATGCA ATTGCTTGCC CTGCGTTGCC CTTATGTGGT CTGGCAGTAA CCGAAGCAGA GAGAACGCTG CCTGTCTTGC TTGAGCGAAT TGATGCTCAG CTGCGACGTC TTGAAATTAC TAAATCGATC CTGATCCGCA TGACAGGTTG TCCCAATGGA TGCGCGCGGC CCTACATGGC CGAGCTTGCT CTAGTGGGAA GTGGTGTCGA TCAATATCAA CTCTGGCTGG GAGGCACCCC AAACCTGCAA CGTCTTGCCA AACCCTATCT ACAGCGGATG CCCCTCGATC AACTCGAGAG CACACTTGAG CCCCTATTGC TGAGCTGGAA GCAAGCTGGT GGTCGACGCA GCCTCGGAGA TCATGTCAAC AAACTTGGCG ATCAAGCCGT CCTTGGTTTG CTGTCTGGTA CTGGCAAGGC TCCATAG
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Protein sequence | MTEGQTTSGQ AADLKFAACL ASGADLSKFE QFKADSCYLL DPLAAELENS SDHFSNDAVQ LLKFHGSYQQ DNRDNRQKGE GKDWQMMLRL RSPGGRIPPS LFLALDDLSN RLGNGSLRAT TRQAFQIHGV RKEDLREVIS TIIRSMGSTL AACGDITRNV MAPAAPYEKG GYPAARQLAN EIADVLSPTA AEGSYLDLWV NGSATYRIRP SRRVKKVRTR QHQGNVFSGD TKEPLYGKTY LPRKFKCAVT VPGDNSVDLL TNDIGLVVFT AANGEIKGCN VYVGGGMGRT HNNEQTFART ADPLGYVAAE HVLDLVQSIL ALQRDYGDRK TRRHARMKYL LNDQGISWFK QELKSKYFLH PIKALRPEPK SKLEDYLGWH QQSVGQWFVG LPLLSGRLEG DLKKGLRQLV ETFQLEIRLT PNQDLLLCNI GTSQRSSVRK GLAALGIRAP EAPAMLARHA IACPALPLCG LAVTEAERTL PVLLERIDAQ LRRLEITKSI LIRMTGCPNG CARPYMAELA LVGSGVDQYQ LWLGGTPNLQ RLAKPYLQRM PLDQLESTLE PLLLSWKQAG GRRSLGDHVN KLGDQAVLGL LSGTGKAP
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