Gene P9303_16611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_16611 
Symbol 
ID4778521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp1450476 
End bp1451165 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content54% 
IMG OID640087170 
ProductABC transporter, ATP-binding component 
Protein accessionYP_001017670 
Protein GI124023363 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR02982] ABC exporter ATP-binding subunit, DevA family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.480332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAA AGCTCATGGT TGAAGTTCAG GGTCTCAGCC ACTGGTTTGG CATTGGTGCA 
ATGCGACGTC AGGTGTTGCA GTCCATTGCT CTGCAAATAG CCCCTGGCGA GGTGGTGTTG
CTCAGCGGGC CTTCAGGCTG TGGCAAAACC ACTCTGCTCA CTTTGATCGG AGCGCTCCGC
ACAGTTCAAG AGGGAGATGT GTGCGTGTTC GGCCATCAGT TACGTGGATC AGATCGTCGC
CTTCGCCAAC AGCTTCGCTG TCATATCGGC ATGATTATTC AGGGCCACAA TCTTTTGCGG
TGTCTCACAG CTGAACAGAA CGTGCAGATG GGAGCTGATT TGTTGCCAGG TCTCTCTTAT
CGGGCTCGCC GTGATCAGGC TCGCTATTGG TTGCGGGCTG TGGGGCTAGA CGATCACCTA
AGCAAACTGC CCCATGATCT TTCTGGCGGC CAAAAACAAC GAGTCGCAAT TGCACGTGCG
CTGGCGGCTC AACCTCAGCT ATTGCTAGCC GATGAACCCA CAGCAGCCCT GGATAGCGTC
ACAGGAAGGG AAGTGGTAGA GCTGCTTCAA CGATTGGCCC GAGAACAGTC TTGTGCGGTG
TTAATGGTGA CCCATGATCC CCGCATTGTT GATCTCGCGG ATCGATTGGT GCAGATGGAA
GATGGTCGCC TAATCTCCTC TCTTGGTTAG
 
Protein sequence
MNEKLMVEVQ GLSHWFGIGA MRRQVLQSIA LQIAPGEVVL LSGPSGCGKT TLLTLIGALR 
TVQEGDVCVF GHQLRGSDRR LRQQLRCHIG MIIQGHNLLR CLTAEQNVQM GADLLPGLSY
RARRDQARYW LRAVGLDDHL SKLPHDLSGG QKQRVAIARA LAAQPQLLLA DEPTAALDSV
TGREVVELLQ RLAREQSCAV LMVTHDPRIV DLADRLVQME DGRLISSLG