Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_09861 |
Symbol | cad |
ID | 4776984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 896568 |
End bp | 897968 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640086494 |
Product | Orn/Lys/Arg decarboxylase family protein |
Protein accession | YP_001017000 |
Protein GI | 124022693 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTTTC TTCCCCTGTT GACTCGCGAC CGTGGTCGCA GCTTGCATCT CCCCGCTCAT GGTCGTGGGG CTGGCTTGCC TGACGATCTG CGTGCAATGT TGCGCCATCG AGCTGGCATC TGGGATCTGC CGGAACTTCC TGAGTTGGGT GGGCCATTGA TGCAGCAGGG GGCGGTGGCA GAGAGTCAAA GGCAGGCAGC GATTGCTATC GGGGCTGAGC GAGGTTGGTA TGGCGTCAAT GGCGCGACAG GCCTCTTGCA GGCTGCTCTC TTGGCAATAG CAAGGCCTGG TCAGGCTGTG TTGATGCCTC GAAATGTCCA TCGCAGCCTC ATTCAGGCTT GTGTTTTGGG CGATCTCACG CCTGTCTTGT TTGACCTGCC TTTCATGGTT GATCGGGGTC ATGTGTTTCC CCCTGATGGA CCTTGGTTGA AGGACGTTTT GAATGAACTT CCTATCGCTG GTGTTGAGAT CGCTGCAGCT GTGTTGGTGC ATCCCACTTA TCAGGGCTAT GCGACGGATC TCAAGCCCAT GGTTGTTGAG CTTCATTCTC GGGGTTGGCC GGTATTAGTG GATGAGGCTC ATGGTGCTCA TTTCGCTAGT CGGGTGGATG CATCTTTGCC TGATTCTGCG ATCACAGCAG GTGCTGACTT AATCGTCCAC TCATTGCACA AATCTGCTGC CGGTTTGACT CAGACCGCAG TGCTTTGGAG CCAAGGGGAT CGCGTTGATC CCAACGCTGT CGAGCGCAGT CTCGGCTGGT TGCAAACCAC CAGTCCAAGC GCACTCTTGC TGGCTTCTTG TGAAGCGTCG CTGAGTGACT TGTGCAAGCC TGCAGGCTTG CACAAGCTGG GAACACGCCT CAAGGATGCT CGCGAATTGG CGGTTCAACT TCGTCAGTTG GGATTGCCTT TGCTTGAGAA CCAGGATCCC TTGCGGCTGA TTTTGCACAC CGCTGCAGAG GGTATCAGCG GACTTGAAGC AGATGCTTGG CTGATGGCCA GGGGGCTGGT GGGCGAACTT CCAGAACCAG GCTGCCTAAC GTTCTGTCTT GGCTTGGCGC CCCAGCGTGG ATTGGTCAGG CTGATGCATC GTCGCTGGCG GGGACTCCTT GCAGCCAAAG GTAAGGGCCT ACCTTTGCCA GTCTTTACGC CCCCGCCACT GCCGCGCATT ACAGCACCAG CAATGGCTTG CGGCTTGGCT TGGCGCGCTC AAAGTCAGAG AGTGTCGATT GCTGATGCGG TAGGGAGAGT CGCGGCGGAG TTAATCTGTC CCTATCCTCC AGGGATTCCC TTGCTAGTGC CAGGTGAGAA GCTGGATCAC AGACGTGTGG ACTGGCTTTT AGAGCAGCAG AACCTTTGGC CCGAGCAGAT CGCTGGTACG GTAAAAGTTC TGGCCTTGTA A
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Protein sequence | MGFLPLLTRD RGRSLHLPAH GRGAGLPDDL RAMLRHRAGI WDLPELPELG GPLMQQGAVA ESQRQAAIAI GAERGWYGVN GATGLLQAAL LAIARPGQAV LMPRNVHRSL IQACVLGDLT PVLFDLPFMV DRGHVFPPDG PWLKDVLNEL PIAGVEIAAA VLVHPTYQGY ATDLKPMVVE LHSRGWPVLV DEAHGAHFAS RVDASLPDSA ITAGADLIVH SLHKSAAGLT QTAVLWSQGD RVDPNAVERS LGWLQTTSPS ALLLASCEAS LSDLCKPAGL HKLGTRLKDA RELAVQLRQL GLPLLENQDP LRLILHTAAE GISGLEADAW LMARGLVGEL PEPGCLTFCL GLAPQRGLVR LMHRRWRGLL AAKGKGLPLP VFTPPPLPRI TAPAMACGLA WRAQSQRVSI ADAVGRVAAE LICPYPPGIP LLVPGEKLDH RRVDWLLEQQ NLWPEQIAGT VKVLAL
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