Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_09841 |
Symbol | |
ID | 4776657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 893575 |
End bp | 894537 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640086492 |
Product | Type II alternative RNA polymerase sigma factor, sigma-70 family protein |
Protein accession | YP_001016998 |
Protein GI | 124022691 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCCT TGGCGGTGCT TTCAGATGTC GACCTGGTGC GTTCATACCT GCGCGATATC GGTCGAGTGC CGCTACTGAG CCATGAGCAG GAGATCACGC TGGGTCGTCA GGTGCAGGAG TTGATGTCTT TAGAGCAGCT TGAGTCTGAA CTGGAAGGTA AAACAGGTGC GCCAGCGAGT CGTAAAGAAC TAGCGAAGGC AGCTGGATTG AGTGAGTTGC AGCTCAAGAA GAAGTTGCAG AGCGGACGAC GTGCGAAGGA GCGGATGGTG TCGGCGAACC TGCGCTTAGT GGTGAGTGTT GCCAAGAAGT ACACCAAAAG GAATATGGAG CTTCTTGATT TGATCCAAGA GGGAACGATC GGCTTGGTGA GGGGAGTGGA GAAGTTCGAC CCAACCCGTG GCTACAAGTT TTCGACCTAT GCGTATTGGT GGATTCGCCA GGGGATCACG CGTGCGATTG CGGAGAAGAG CCGGACGATC CGTCTGCCGA TCCACATCAC AGAGATGCTG AACAAGCTCA AGAAAGGCCA GCGAGAGTTA AGTCAGGAGA TGGGGCGCAC GCCAACAGTG AGCGAACTTG CAGAGTTTGT GGAGTTGCCC GAGGAGGAGG TGAAGGATCT GATGTGCCGT GCACGTCAGC CGATGAGTTT GGAGATGAAG GTGGGAGATG GGGATGAAAC GGAGTTGCTT GAGTTGCTTG CCGGGGAAGA GGAGTTACCG AGTGAGAAGG TGGAAGTGGA TTGCATGAAA GGCGATTTAC GTACCTTGCT GGAAAAGTTG CCCGAGTTGC AGGGTCGTGT GCTGCGGATG CGTTATGGAA TCGACGGAGG CGAGCCGATG AACCTCACCG GGATTGCTAA GACTTTAGGA ATGAGTCGCG ATCGAACACG CCGTCTGGAG AGGGAAGGCT TGGCGTTGAT GCGAACCTCC TCGTTTGAAC TTGAGGCTTA TATGGTGGTT TGA
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Protein sequence | MAPLAVLSDV DLVRSYLRDI GRVPLLSHEQ EITLGRQVQE LMSLEQLESE LEGKTGAPAS RKELAKAAGL SELQLKKKLQ SGRRAKERMV SANLRLVVSV AKKYTKRNME LLDLIQEGTI GLVRGVEKFD PTRGYKFSTY AYWWIRQGIT RAIAEKSRTI RLPIHITEML NKLKKGQREL SQEMGRTPTV SELAEFVELP EEEVKDLMCR ARQPMSLEMK VGDGDETELL ELLAGEEELP SEKVEVDCMK GDLRTLLEKL PELQGRVLRM RYGIDGGEPM NLTGIAKTLG MSRDRTRRLE REGLALMRTS SFELEAYMVV
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