Gene P9303_08241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_08241 
Symbol 
ID4777210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp748660 
End bp750456 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content54% 
IMG OID640086333 
Productputative multidrug efflux ABC transporter 
Protein accessionYP_001016840 
Protein GI124022533 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTA CTGATTTTCA GCGGGTTCGG CGTCTGGGGC GTTATCTCCG TGAGGACCGT 
CGGCGTTTAT GGATCGTCCT GTCTCTCTTG GTGCCGCTAG CTCTTGCTGG TGCGATTCAA
CCCCTCTTGG TTGGCCAGGC AATCAGTGTT TTGAAGCAAG AGTCAACCTT CCCTTGGCTC
AGTGATCTGC CAGTGAGCTC AGCAATAAGA CTTTTGGTGG GGATTCTGCT GATTTCTGTG
CTTCTGCGCT TGGGTCTGCA GGGCTTTCAG TCTTTCAATA TCGAGGCCTT AGGGCAACGG
CTAACGGCGC GTATTCGTAA CGATCTGTTT GGCCACGCCA TGGCCCTTTC GCTGCGCTTT
CACGATCGAA TGCCTGTGGG CAAGTTGTTG ACTCGGCTGA CCAGTGATGT GAATGCACTG
TCTGAGGTTT TTGGCAGTGG GGCAGTGGGA GTTTTGGGCG ACCTCGTCAG CCTTGTGGTG
ATTGCAGTCA CCATGATTTT GATTGATTGG CGCCTGGGGG GGTTGCTGCT GGTTACGCAG
GTACCGGTCA CCTTGGTGAT CCTTTGGTTG CAACGCCGAT ACCGGAAAGC CAATTACCGC
GTGAGGGAGG AACTCTCTCA GCTCAATGCC GATTTTCAGG AAAACCTTCA GGGGCTTGAG
GTTGTCCAGA TGTTTCGTCG AGAAACGGTT AATGGGCAGC TATTTGATCG CACTGGCTCG
GCCTACAGGC AAGCCGTGAA TGGAACGATC TTTTATGACA GCAGCATTTC AGCTTTTATC
GAATGGGTGG CCCTGGCAGC CGTGGCTGCG GTGCTGGCGC TTGGGGGATG GATGGTAACT
GCCGAGACAA TGGGCCTTGG CACCTTGACA ACGTTCATCC TTTATTCCCA GCGTTTGTTT
GATCCCCTGC GTCAACTTGC TGATCGCTTC ACTCAGATTC AGGGGGGACT GACTGCTGTT
GAACGGATTG GCGAGTTGCT GGAGCAGCCA CTTGACATTG TCGATGCAAA GTCTGTTAAA
GACGAACCCA GCGTTGTTAG GCCCTCGGCT TCTGCTGCTT GCGGTGAGGT GGTGTTTGAG
GGGGTGAGCT TTGCCTATCG GCCGGACGAG CCGATTCTCC AGGACCTTAG TTTTCGCATT
TCTGCTGGTG AACATGTTGC CCTGGTAGGA CCAACCGGTT CAGGCAAGAC GACCCTGATC
CGCTTGCTGT GTCGTCTTTA CGAGCCTCAA GTCGGGCGGA TCATGCTTGA TGGTGTTGAC
ATCAAAACAA TCCCTCTTTG GCGGCTACGC AAACAACTGG GGGTTGTGCT TCAGGACACC
TTTCTATTTA GCGGCAATGT TGCAGATAAC CTCCGATTGG ATTCCTCGAT TGAGGATGAC
CGTTTGCGGG CGATCTGTAG AGATCTTGGC CTTGATCCTT TGCTCAATCG GCTACCCAAC
GGCTTGGAGA CTGAGCTCAG GGAGCGTGGC GGCAATTTGT CATCGGGAGA GAGACAGCTC
TTAGCAGTTG CAAGGGTGGC CATTCGCAAC CCCACTGTGC TGGTTATGGA TGAGGCGACG
GCTTTCATGG ACCCTTCTAC GGAAGCGACA TTGCAAAGGG ATCTAGATCG CTTGCTTGAA
CGTCGCACCG CGGTTGTTAT TGCCCATCGC CTGGCCACTG TGGAAGCAGC CGATCGAATC
ATGGTGCTTC GGCGGGGCAA GCTGATTGAG CAGGGAACCC ACCTTGAGCT TCGTGCCAAG
GGAGGCCTTT ATTCTCAGTT AGCGGAACTA CAGGAAAGGG GACTGGCGAA ACTTTGA
 
Protein sequence
MAVTDFQRVR RLGRYLREDR RRLWIVLSLL VPLALAGAIQ PLLVGQAISV LKQESTFPWL 
SDLPVSSAIR LLVGILLISV LLRLGLQGFQ SFNIEALGQR LTARIRNDLF GHAMALSLRF
HDRMPVGKLL TRLTSDVNAL SEVFGSGAVG VLGDLVSLVV IAVTMILIDW RLGGLLLVTQ
VPVTLVILWL QRRYRKANYR VREELSQLNA DFQENLQGLE VVQMFRRETV NGQLFDRTGS
AYRQAVNGTI FYDSSISAFI EWVALAAVAA VLALGGWMVT AETMGLGTLT TFILYSQRLF
DPLRQLADRF TQIQGGLTAV ERIGELLEQP LDIVDAKSVK DEPSVVRPSA SAACGEVVFE
GVSFAYRPDE PILQDLSFRI SAGEHVALVG PTGSGKTTLI RLLCRLYEPQ VGRIMLDGVD
IKTIPLWRLR KQLGVVLQDT FLFSGNVADN LRLDSSIEDD RLRAICRDLG LDPLLNRLPN
GLETELRERG GNLSSGERQL LAVARVAIRN PTVLVMDEAT AFMDPSTEAT LQRDLDRLLE
RRTAVVIAHR LATVEAADRI MVLRRGKLIE QGTHLELRAK GGLYSQLAEL QERGLAKL