| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_06291 |
|---|
| Symbol | ndhB |
|---|
| ID | 4776314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 592154 |
|---|
| End bp | 593725 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640086136 |
|---|
| Product | NAD(P)H-quinone oxidoreductase subunit 2 |
|---|
| Protein accession | YP_001016646 |
|---|
| Protein GI | 124022339 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0962124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAA TGGGTGTATT TCTTCTCGCC ACCCAGGCCA TGGCAGCTCC AGGGGAGCTG
CTCAACCTTG CACTGAATGC TGGTGCGATT GCCCCTGAAG GGGCTGTTCT CGTCGCAATG
CTGGCGACCC TACTTGTGGA CTTGGCCGGT GAGCAGGCTG CAGCCCGCTG GGTCCCCCCC
ATTTGTTATG CCGGCCTTGG CACAGCACTC GTGCTCCTCG CCCAGCAATG GAATGCCCCT
CTGGAACCCT CGTTCCTTGG AGCTTTTCTG GCTGACAACC TGGCCATTGC CTTTCGGGCA
GTGGTGGCGC TCTCTACCTT GCTGTCACTA CTGATCAGCT GGCGCTACGC GGAACAGAGC
GGCACGCCAA TTGGTGAATA TGCCGCCATC CTTCTGGCCG CAACCCTCGG GGCAATGCTC
CTTTGCGGCT CAACTGATCT TGTGAGCGTG TTCGTCTCCC TCGAGACCCT CTCCGTGGCG
AGCTACCTAC TGGCTGGCTA CATGAAACGA GATGCCCGTA GTTCCGAAGC AGCACTCAAA
TATCTGCTGG TGGGCTCCGC CGCGGCAGCA GTATTTCTCT ACGGCGCCTC TCTTCTCTAC
GGGCTCAGCG GCACTACCAG CTTGCAGGCT ATTGGCATTG CTTTACTCAC CAGCCCTACT
CCACTGGCCG CACTATCACT GGTCTTCGTA CTTGCCACGG TGGCCTTCAA AATTGCTGCG
GTGCCTTTCC ACCAATGGAC CCCGGATGTC TATGAAGGGT CCCCAACTCC AGTGGTCGCA
TTCCTCTCAG TGGGGTCTAA AGCTGCTGGC TTTGCTCTTG CACTGAGGTT GTTGGTTGGT
TGCTTCGGTG CCTTCGACAA CCAATGGAAA TTGCTTTTCA CCGTGCTGGC TGTGTTGAGC
ATGACCCTGG GCAACGTTGT CGCGCTGGCG CAGACATCAA TGAAACGAAT GCTGGCTTAC
AGCTCCATCG GCCAGGCAGG ATTCGTGATG ATTGGCCTGG TGTGCGGAAC CGAAGACGGC
TTCGCTGCAA TGGTTCTCTA TATGGCTGCC TATCTATTCA TGAACCTGGG AGCCTTTGCC
TGCATCATCC TCTTCTCGAT CCGCACGGGA AGTGATCGAA TTTCTGACTA TGCAGGTCTC
TATCAGAAGG ATCCGTTGAT AACGCTGGGA CTCAGCCTCT GCCTTCTTTC CTTGGGTGGC
ATACCTCCGA TGCTCGGATT TTTTGGCAAG ATCTATCTTT TCTTTGCTGG CTGGGCCGAC
CATCAATACC TCCTCGTCGT TGTTGGCCTA GTGACCTCCG TAGTGTCGAT TTATTACTAC
ATCTCTGTTA TCAAAATGAT GGTGGTCAAA GAACCAAAAG AAGCTTCCGA TGTCGTGAAG
TCCTATCCAT CGATCCAGTG GTCAACGATT GGAATGCCTC CACTTCGAAT AGCACTAGTG
GGTTGCGTTG TTGTAACAGC CGTTGGGGGG ATCCTTTCAA ATCCTCTCTT TCAATGGGCG
AATAATGCCG TAGCCGGCAC GCCGCTTCTC CAGGAAGCCA TAGCTCTAGG CAGCCAACGA
TCTATTGGCT AA
|
|---|
| Protein sequence | MPEMGVFLLA TQAMAAPGEL LNLALNAGAI APEGAVLVAM LATLLVDLAG EQAAARWVPP
ICYAGLGTAL VLLAQQWNAP LEPSFLGAFL ADNLAIAFRA VVALSTLLSL LISWRYAEQS
GTPIGEYAAI LLAATLGAML LCGSTDLVSV FVSLETLSVA SYLLAGYMKR DARSSEAALK
YLLVGSAAAA VFLYGASLLY GLSGTTSLQA IGIALLTSPT PLAALSLVFV LATVAFKIAA
VPFHQWTPDV YEGSPTPVVA FLSVGSKAAG FALALRLLVG CFGAFDNQWK LLFTVLAVLS
MTLGNVVALA QTSMKRMLAY SSIGQAGFVM IGLVCGTEDG FAAMVLYMAA YLFMNLGAFA
CIILFSIRTG SDRISDYAGL YQKDPLITLG LSLCLLSLGG IPPMLGFFGK IYLFFAGWAD
HQYLLVVVGL VTSVVSIYYY ISVIKMMVVK EPKEASDVVK SYPSIQWSTI GMPPLRIALV
GCVVVTAVGG ILSNPLFQWA NNAVAGTPLL QEAIALGSQR SIG
|
|---|
| |