Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_04621 |
Symbol | fumC |
ID | 4778948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 464902 |
End bp | 466299 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640085966 |
Product | fumarate hydratase |
Protein accession | YP_001016479 |
Protein GI | 124022172 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC TGATGCGTAT CGAACACGAC AGCATGGGCA CTGTTGAGGT GCCCGCTGGG GTTCTCTGGG GTGCACAAAC CCAGCGATCG CTCCTTAACT TCGCCATCAG CACAGACCGC ATGCCAGTCG AACTGATCCA TGCCTTGGCA TTGATCAAAC AGGCTGCCGC CAGCGTGAAC TGTCGCCTGG GTGTTCTCGA TGAAATCCAG CGGGATCAAA TTATCAAGGC CGCCTCTGCT GTTGCATCCG GTCTCCATGA CGATCAGTTT CCACTGAGGG TCTGGCAGAC CGGTAGCGGT ACCCACACAA ACATGAATGT CAACGAGGTG ATTAGCAACC TGGCGTCTCA GGCAAACGAC GAACCTCTAG GTAGCCATAG CCCGGTGCAT CCAAACGATC ATGTCAATCG ATCCCAGTCC ACCAATGACG CCTTCCCTAC AGCTATACAT ATCGCCGCAG TCCACGGGAT CACTAAAAAC TTGCTGCCTG AACTGGAGCG ATTGATCGCA GCCTTTGCCC GAAAAAGCAA TGCCTGGAGT GACATCATCA AAATCGGTCG CACTCATCTA CAGGACGCCG TACCTCTCAC CCTTGGTCAG GAGGCCTCTG CGTGGCGGGA TCAAATTGCC TCAGCCCATA GTCGTATTCA GTCAAGCCTG ATAGAGCTCT ACCCTCTGCC GCTTGGAGGC ACCGCCGTGG GGACTGGCCT CAACGCCCCA GCTCGCTTCG GGCAAGAAAC AGCTGCGCAA CTTGCCAGCA TCACAGGCCT GCCATTCAGC TCAGCTAAAA ACAAGTTCGC CGTGATGGCG AGCCATGACG GGTTAGTGAA TGCAATGGCT CAGTTGCGCA TGTTGGCGGT TGCCCTATTC AAGATCTCCA ATGATCTGCG CCTACTGGCC TGTGGCCCAA GGGCCGGCCT GGCAGAGCTG CATCTACCTG AGAATGAGCC GGGAAGCTCG ATCATGCCTG GGAAAGTCAA CCCCTCTCAA TGCGAGGCCA TGGCCATGGT CTGTTTACAA GTCATCGGGC TTGATTCAGC CGTGACCATG GCAGGTGGTA GTGGTCATCT CCAAATGAAC GTCTACAAAC CCCTGATTGG CTTCAACCTG CTTCACAGCA TTGAATTGCT ACATGACGCC TGCCGCAATT ACCGGCTGGC AATGGTGCAA GGGATTGAAC CAAACCGAAT CAAGATCCAG CATGATCTAG AGCAATCGCT GATGCTAGTA ACAGCTTTAA CCCCAGAAAT CGGTTACGAC AAAGCCAGTG AGATTGCCCA CCTCGCCCAT GAGAAGGGAT TCAGCCTGCG TGAAGCAGCA CTAACACTCG GCTATGTGAG CAAAGAAGAC TTCGATCGCA TTGTTAATCC GGCATTGATG ACATCTGCTC GGCTGTGA
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Protein sequence | MADLMRIEHD SMGTVEVPAG VLWGAQTQRS LLNFAISTDR MPVELIHALA LIKQAAASVN CRLGVLDEIQ RDQIIKAASA VASGLHDDQF PLRVWQTGSG THTNMNVNEV ISNLASQAND EPLGSHSPVH PNDHVNRSQS TNDAFPTAIH IAAVHGITKN LLPELERLIA AFARKSNAWS DIIKIGRTHL QDAVPLTLGQ EASAWRDQIA SAHSRIQSSL IELYPLPLGG TAVGTGLNAP ARFGQETAAQ LASITGLPFS SAKNKFAVMA SHDGLVNAMA QLRMLAVALF KISNDLRLLA CGPRAGLAEL HLPENEPGSS IMPGKVNPSQ CEAMAMVCLQ VIGLDSAVTM AGGSGHLQMN VYKPLIGFNL LHSIELLHDA CRNYRLAMVQ GIEPNRIKIQ HDLEQSLMLV TALTPEIGYD KASEIAHLAH EKGFSLREAA LTLGYVSKED FDRIVNPALM TSARL
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