| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_01971 |
|---|
| Symbol | thiC |
|---|
| ID | 4777241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 215312 |
|---|
| End bp | 216691 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640085696 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_001016217 |
|---|
| Protein GI | 124021910 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCT CTTGGGTGGC TGCCCGTAAG GGTCAGGCCA ATGTCTCGCA ATTGCATTTC
GCTCGACAGG GCGTTGTCAC TCAAGAAATG GACTACGTGG CCAGGCGGGA AAACTTGCCT
GAATCGCTTG TCATGGAGGA GGTGGCCCGG GGCAGGATGA TTATTCCTGC CAACATCAAT
CATGCAAATT TAGAGCCGAT GGCGATTGGT ATCGCCTCCA GCTGCAAGGT GAATGCAAAC
ATTGGCGCCT CACCTAACGC CAGTGATGTA GCTGAAGAGC TCAAGAAGCT CGAGCTGGCA
GTTAAATATG GCGCAGACAC CGTGATGGAT CTGTCCACTG GAGGGGTCAA TCTTGATGAG
GTGCGCACGG CGATCATTAA TGCTTCACCC GTGCCGATCG GCACTGTGCC TGTCTATCAG
GCGTTGGAAA GCGTGCATGG CTCGATTGAG AAGCTCGACG AAGATGACTT CCTACACATC
ATTGAGAAGC ATTGCCAGCA GGGTGTCGAC TATCAAACCA TTCACGCCGG TTTGTTGATT
GAGCACCTTC CGTTGGTGAA GGGACGCCTG ACAGGCATCG TCAGTCGCGG GGGTGGAATT
CTTGCTCAGT GGATGCTTTA TCACCACAGA CAGAACCCTC TTTTCACCCG CTTTGACGAC
ATCTGCGAGA TCTTCAAGCG CTACGACTGC AGTTTTTCAC TTGGTGATTC TCTTCGTCCT
GGTTGTCAGC ACGATGCTTC TGATGCAGCT CAACTTGCCG AGTTGAAGAC CCTTGGAGAA
TTGACTAAGA GAGCTTGGGC ACATGACGTG CAGGTGATGG TCGAGGGTCC TGGTCATGTA
CCAATGGATC AGATCGAATT CAATGTGCGC AAGCAGATGG AAGAGTGCAA TGAGGCACCC
TTTTATGTGC TTGGCCCTTT GGTGACAGAC ATCGCACCGG GTTATGACCA CATCACGAGT
GCCATCGGTG CGGCGATGGC AGGCTGGTAT GGAACAGCGA TGCTTTGTTA TGTGACCCCG
AAGGAGCATT TGGGTCTGCC AAACCCTGAG GATGTTCGTG AGGGCTTGAT TGCCTACAAA
ATTGCAGCGC ATGCCGCTGA CATCGCTCGT CACCGTCCGG GTGCTCGAGA TCGCGATGAT
GAATTAAGCC GAGCAAGGTA CAACTTTGAT TGGAACAAAC AGTTTGAGCT TTCACTTGAT
CCAGAGCGAG CCAAGCAGTA TCACGATGAA ACTTTGCCAG CTGACATTTA CAAGCAAGCT
GAGTTTTGTT CAATGTGTGG TCCAAAGCAT TGTCCAATGC AGACCAAAAT TACGGATGAG
GATCTAGAAG GTCTCGAAAA ATCTCTCAAA AGTAAAGGGA AAGCTGAGTT GCCAGCTTAG
|
|---|
| Protein sequence | MRASWVAARK GQANVSQLHF ARQGVVTQEM DYVARRENLP ESLVMEEVAR GRMIIPANIN
HANLEPMAIG IASSCKVNAN IGASPNASDV AEELKKLELA VKYGADTVMD LSTGGVNLDE
VRTAIINASP VPIGTVPVYQ ALESVHGSIE KLDEDDFLHI IEKHCQQGVD YQTIHAGLLI
EHLPLVKGRL TGIVSRGGGI LAQWMLYHHR QNPLFTRFDD ICEIFKRYDC SFSLGDSLRP
GCQHDASDAA QLAELKTLGE LTKRAWAHDV QVMVEGPGHV PMDQIEFNVR KQMEECNEAP
FYVLGPLVTD IAPGYDHITS AIGAAMAGWY GTAMLCYVTP KEHLGLPNPE DVREGLIAYK
IAAHAADIAR HRPGARDRDD ELSRARYNFD WNKQFELSLD PERAKQYHDE TLPADIYKQA
EFCSMCGPKH CPMQTKITDE DLEGLEKSLK SKGKAELPA
|
|---|
| |