Gene P9303_00091 details

Gene Information

• Locus tag: P9303_00091
• Symbol: nusB
• ID: 4778488
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 12142
• End bp: 12777
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640085508
• Product: transcription antitermination protein NusB
• Protein accession: YP_001016031
• Protein GI: 124021724
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAGTCCA GATCACTTGC TCGAGAACTG GCTCTTTTGG TGCTTGGTCA GATTCCCGAA 
CGTGAAAGTT CGAGGTTGAA AACAATATCT TTGGAGAGTC TTCTTCAGAA GGCTTTTGAT 
ACCCTGAGTC AGCATTGGAG AGAGGGTCTT GATACTTGTG CTGTTGAGCT TGAGAATGCT 
CAACAGCATT TACTCGATAG TGAGTTTCAA GATCGTGATG CGAGCTCTAC GAGTCAGGTT 
CGTGAGCATT TACAGGCTTG TCTTATTGGT GCAGAACAGG TTATTAATGG TGTTTCAACA 
AGTTTGGAAA TCCCCCGTTT GCTGGCGTTA GGAAACCAGG AGCAGATTCG GCTTGGGGCT 
CTAGAGCGTG TGAGGTTGGT GATAGAAAAA CGCAACAGCA TTGATGCAAG TATTGATGCT 
GTTATGGAGG GCTGGCGCTT GAGTCGTTTG CCTCGTATTG ATCGGGATAT CTTGAGGTTG 
GCTGTGGTGG ACTTGACTGC TCTTCAGACT CCATCTGCTG TGGCTTGCAA TGAAGCTGTT 
GAATTGGCCC ATCGCTACAG CGATGATCAA GGTCGTCGCA TGATTAATGG TGTCTTGAGA 
CGCTTGCATG ATGCCTCCAC TGTGACGTTG GCCTAA 

 

Protein sequence

MQSRSLAREL ALLVLGQIPE RESSRLKTIS LESLLQKAFD TLSQHWREGL DTCAVELENA 
QQHLLDSEFQ DRDASSTSQV REHLQACLIG AEQVINGVST SLEIPRLLAL GNQEQIRLGA 
LERVRLVIEK RNSIDASIDA VMEGWRLSRL PRIDRDILRL AVVDLTALQT PSAVACNEAV 
ELAHRYSDDQ GRRMINGVLR RLHDASTVTL A