| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_18211 |
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| Symbol | |
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| ID | 4911470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | - |
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| Start bp | 1541677 |
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| End bp | 1542711 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640161425 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001092045 |
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| Protein GI | 126697159 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATTGT TTACAAAACA TCATTTAGCA TTCATGTCCT CTGAAACAAT AAGTGAAAAT
AAACTAACGT CAATCGCAAG TTTAAAAGCA AGTAATGATG TAGATCTTGT TCGATCATAT
TTGAGGGATA TAGGAAGAGT TCCCTTACTA TCGCATGAGC AAGAAATTAC TCTAGGTCGA
CAAGTTCAAG AGTATATGCA AGTTGAAAGA GCTGAATTAG AAATCAGCGA ATTAACAGGA
GATAAACCCA GTATTGATGA ATTATCGACG AAATTAAACT TGTCTACTTC AGTAATAAAA
AAAAGATTGA GAGCTGGACA GAGAGCTAAA GAAAGAATGG TTGCAGCAAA TTTAAGATTG
GTAGTGAGCG TTGCAAAAAA ATATACAAAA AGAAATATGG AACTTTTAGA TTTAATTCAG
GAGGGAACTA TAGGACTTGT TAGAGGAGTT GAAAAATTTG ATCCAGCGAG AGGCTACAAG
TTTTCAACAT ATGCATATTG GTGGATTAGA CAAGGTATTA CTAGAGCAAT AGCTGAAAAG
AGTCGGGCGA TTAGGTTGCC TATCCACATT ACCGAAATGT TGAATAAGTT AAAAAAGGGT
CAAAGAGAGC TCAGTCAAGA AATGTCTAGA ACTCCAACTG TAAGTGAACT TGCGAAATAC
GTAGAGCTTC CAGAAGATGA CGTTAAAGAC TTAATGTGCA AAGCTGGGCA GCCAGTTAGT
CTTGAAACCA AGGTAGGTGA TGGTGAAGAT ACTGTTTTAC TAGATTTACT TGCAGGGGGC
GAGGATTTGC CAGACGAACA AATTGAGATG GATTGTATGA GAGGTGATCT TCATTCTCTT
TTACATCAAT TACCTGATCT GCAATGTAGG GTTTTAAGAA TGAGATACGG GATGGATGGT
GATGAGCCAA TGTCTCTTAC AGGTATAGGA AGGGTCCTAG GAATAAGTAG AGATCGAGTA
AGAAACCTAG AACGTGATGG TTTAAGAGGC TTGAGAAGAC TTAGTCATAA TGTAGAAGCT
TACTTCGTTT CTTGA
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| Protein sequence | MVLFTKHHLA FMSSETISEN KLTSIASLKA SNDVDLVRSY LRDIGRVPLL SHEQEITLGR
QVQEYMQVER AELEISELTG DKPSIDELST KLNLSTSVIK KRLRAGQRAK ERMVAANLRL
VVSVAKKYTK RNMELLDLIQ EGTIGLVRGV EKFDPARGYK FSTYAYWWIR QGITRAIAEK
SRAIRLPIHI TEMLNKLKKG QRELSQEMSR TPTVSELAKY VELPEDDVKD LMCKAGQPVS
LETKVGDGED TVLLDLLAGG EDLPDEQIEM DCMRGDLHSL LHQLPDLQCR VLRMRYGMDG
DEPMSLTGIG RVLGISRDRV RNLERDGLRG LRRLSHNVEA YFVS
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