| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_14441 |
|---|
| Symbol | gmd |
|---|
| ID | 4911348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | + |
|---|
| Start bp | 1214430 |
|---|
| End bp | 1215524 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640161036 |
|---|
| Product | gdpmannose 4,6-dehydratase |
|---|
| Protein accession | YP_001091668 |
|---|
| Protein GI | 126696782 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.327555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA AAGTTGCTCT TATTACGGGA ATAACTGGAC AGGATGGAAG TTATCTTGGT
GAATTCTTGT TATCAAAAGG TTACGAAGTA CATGGAATTA AAAGAAGATC TAGTTCTTTC
AATACTGAAA GAATTGATCA TCTTTACCAA GATCCACACA AAAGCAAATG TAGGTTTTTC
TTGCATTATG GAGATTTAAC TGACAGCACA AATATTCTAA AGTTAATAGA AAAAATCCAA
CCAGATGAAA TATATAATCT TGGAGCACAA AGCCACGTCG CAGTTAGTTT CGAATCTCCT
GAATATACAG CTAATAGCGA TGCACTGGGG ACCTTAAGAA TTTTAGAAGC AGTAAAAATT
TTAAAGTTAA TAAATAAAAC TAAGGTTTAT CAGGCAAGTA CTTCAGAATT ATTTGGTAAA
GTACAAGAAA TTCCTCAAAC AGAATCCACT CCTTTTTATC CTGCAAGTCC ATATGGTGTG
GCAAAGTTAT ATGCTTATTG GATTACTGTT AACTACAGAG AATCTTATGG GATGTTTGCA
TCAAACGGAA TATTATTTAA TCATGAAAGT CCCAGGAGAG GTGAAACATT TGTTACGAGA
AAAATCACAA GAGGTTTAGC AAGAATAGAT CAAGGATTAG ACGAAATATT ATATTTAGGT
AATCTAGATG CAAAACGAGA TTGGGGACAT GCAAAAGATT ACGTCGAAGT TCAATGGAAA
ATATTGCAAC ATTCTAAACC TGATGATTTT GTAATCGCTA CTGGTAGACA AGAAAGTGTT
AGAAGATTTG TTGAACTTGC ATCAATTGAA CTTGGATGGG GAGGCATTAT TTGGGAAGGT
GAAGGAGAGA ATGAAATTGG CAAAAGAAAA GATAGTAGTA AAATTGTTAT TAAGGTAGAT
AAACGATATT TCAGGCCTAG CGAGGTACAA GAATTACTTG GTAATAACTT TAAGGCAAAA
AAAATTCTAG GATGGGAATC AAAGATAACT CTAGAAAAGC TTATCAAAGA AATGATCCAA
AATGATAAAG AATTAGCTGC TAAAGAATCA TTATTAAAAA GGGAAGGTTA TAAGATAAAT
AGCTCAAATG AATAA
|
|---|
| Protein sequence | MTKKVALITG ITGQDGSYLG EFLLSKGYEV HGIKRRSSSF NTERIDHLYQ DPHKSKCRFF
LHYGDLTDST NILKLIEKIQ PDEIYNLGAQ SHVAVSFESP EYTANSDALG TLRILEAVKI
LKLINKTKVY QASTSELFGK VQEIPQTEST PFYPASPYGV AKLYAYWITV NYRESYGMFA
SNGILFNHES PRRGETFVTR KITRGLARID QGLDEILYLG NLDAKRDWGH AKDYVEVQWK
ILQHSKPDDF VIATGRQESV RRFVELASIE LGWGGIIWEG EGENEIGKRK DSSKIVIKVD
KRYFRPSEVQ ELLGNNFKAK KILGWESKIT LEKLIKEMIQ NDKELAAKES LLKREGYKIN
SSNE
|
|---|
| |