| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_13501 |
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| Symbol | psbC |
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| ID | 4912436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 1127422 |
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| End bp | 1128804 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640160939 |
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| Product | photosystem II PsbC protein (CP43) |
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| Protein accession | YP_001091574 |
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| Protein GI | 126696688 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.151398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAACGC CCTTTAATAA TTTATTAAGA GCTCCAAACC AAAGTATTGA GGAAACTGGT
TATGCCTGGT ATGTAGGCAA CGCTAGATTA ATCAATTTAT CTGGACGTTT ATTAGGAGCT
CACATTGCTC ACTCTGGACT AATAGTCTTT TGGGCGGGAG CAATGATGCT CTTTGAGGTT
AATCACTTTA CTTTTGATAA ACCAATGTGG GAGCAAGGTT TAATCTGTAT GCCACACGTC
GCGATGTTTG GCTATGGAAT AGGCCCTGGT GGTGAAGTTA CTGATATCAT GCCTTTCTTC
CAGGCAGGCG TGGTTCACTT AATAGCTTCT GCTGTTCTTG GTTTTGGTGG TATTTATCAC
TCATTAGCAG GTCCAGAAAA ACTCGAAGAA GATTTTCCAT TTTTCTCCAC CGACTGGAGA
GACAAAAACC AAATGACAAA TATCCTTGGA TATCATTTGA TTGTTTTAGG TGTAGGTGCG
TTAGCATGGT CAGTTAACTG GTGTTTTATT GGCGGTGCAT ATGATACATG GGCACCAGGC
GGTGGTGAAG TCAGACTTGT TAACCCAACT TTAGATCCAA GAGTTATTCT TGGTTATTTA
TTCAGATCTC CATGGGGAGG AGCTGGATCA ATAATCGGCG TTAACTCCAT AGAAGATATT
GTTGGTGGTC ACGTTTATGT TGGAATTACT GCAATTATCG GTGGAATATT CCATATCTTT
ACCAAACCTT TTGGATGGGC AAGAAGAGCA TTTATCTGGA ATGGTGAAGG CTTATTAAGT
TATGCACTTG GTGGAATTTG TGTAGCAAGT TTTATTGCTT CAACATTCAT CTGGTTTAAC
AACACTGCTT ACCCTTCAGA ATTCTACGGT CCAACTAATG CTGAAGCATC ACAGGCTCAA
AGTTTTACTT TCCTTGTGAG AGATCAAAGA ATTGGAGCTA ATGTAGGTTC AACAATGGGA
CCAACAGGTC TAGGTAAGTA TCTCATGAGA TCTCCTACTG GTGAAATTAT ATTTGGTGGT
GAAACAATGA GATTTTGGGA TTTCAGAGGT CCATGGTTAG AGCCTTTAAG AGGTCCTAAC
GGATTGAGCC TTGAGAAAAT CCAAAATGAT ATTCAGCCTT GGCAGGTAAG AAGAGCCGCT
GAATATATGA CTCATGCTCC TAACGCTTCT ATCAACTCTG TTGGTGGAAT TATTACAGAG
CCAAATGCTG TTAACTTCGT TAACCTTAGA CAGTGGTTAG CTGCAGCTCA ATTCTTCCTA
GGATGGTTTA CATTCATTGG TCACCTTTGG CATGCTGGAC GTGCTAGAGC AGCCGCTGCT
GGTTTCGAAA AAGGAATCGA CAGAAAGAGT GAACCGGCTC TAGAAATGCC TGATTTAGAT
TAA
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| Protein sequence | METPFNNLLR APNQSIEETG YAWYVGNARL INLSGRLLGA HIAHSGLIVF WAGAMMLFEV
NHFTFDKPMW EQGLICMPHV AMFGYGIGPG GEVTDIMPFF QAGVVHLIAS AVLGFGGIYH
SLAGPEKLEE DFPFFSTDWR DKNQMTNILG YHLIVLGVGA LAWSVNWCFI GGAYDTWAPG
GGEVRLVNPT LDPRVILGYL FRSPWGGAGS IIGVNSIEDI VGGHVYVGIT AIIGGIFHIF
TKPFGWARRA FIWNGEGLLS YALGGICVAS FIASTFIWFN NTAYPSEFYG PTNAEASQAQ
SFTFLVRDQR IGANVGSTMG PTGLGKYLMR SPTGEIIFGG ETMRFWDFRG PWLEPLRGPN
GLSLEKIQND IQPWQVRRAA EYMTHAPNAS INSVGGIITE PNAVNFVNLR QWLAAAQFFL
GWFTFIGHLW HAGRARAAAA GFEKGIDRKS EPALEMPDLD
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