| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_04791 |
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| Symbol | ispD |
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| ID | 4912656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 419087 |
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| End bp | 419758 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640160057 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001090703 |
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| Protein GI | 126695817 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0534577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCACTTTT TAATACCAGC TGCAGGGAGC GGTAGCAGAA TGAAAGCTGG AAAAAATAAA
TTACTTATTG ATTTAGAGGG AGAGTCTTTG ATTTATTGGA CACTTAAATC TGTATTTTCT
GCAAGCTCAA CAAATTGGGT TGGAATAATT GGGCAACCGA AAGATAAGAA TTTATTATTA
AATTCAACAA AGGATTTTGC CCATAAAGTT CATTGGATTA ATGGTGGTGA CACTAGACAA
CAGTCAGTTT TTAATGGGTT AAAAGCGCTG CCAAAAGATG CTGAAAAAGT GTTGATACAT
GATGGTGCTA GATGTCTAAT TAATCCTGAA TTGATAGACC TTTGTGCCAA GCAATTAGAT
GAAAATGAAG CAGTAATTTT GGCTACTAAG GTAACTGACA CAATAAAGAT TGTTGATAAT
GAAGGTTTTA TTAAAGAAAC ACCAGATAGA AATTATTTAT GGGCAGCGCA AACTCCTCAG
GGCTTTTTAG TAGATAGATT AAAAAAAGCT CATAAGATGG CAATTGATAA AAACTGGAAT
GTCACAGATG ATGCCTCACT ATTCGAAATG CTTAATTGGA AAGTGAAGAT TATTGAAGGA
ACTTATTCAA ATATAAAGAT TACATCTCCT ATAGATTTAA AAATAGCAAA ACTTTTTGTG
AAGAACCCCT AG
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| Protein sequence | MHFLIPAAGS GSRMKAGKNK LLIDLEGESL IYWTLKSVFS ASSTNWVGII GQPKDKNLLL
NSTKDFAHKV HWINGGDTRQ QSVFNGLKAL PKDAEKVLIH DGARCLINPE LIDLCAKQLD
ENEAVILATK VTDTIKIVDN EGFIKETPDR NYLWAAQTPQ GFLVDRLKKA HKMAIDKNWN
VTDDASLFEM LNWKVKIIEG TYSNIKITSP IDLKIAKLFV KNP
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