Gene P9301_04421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_04421 
Symbol 
ID4911335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand- 
Start bp386592 
End bp387263 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content31% 
IMG OID640160020 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001090666 
Protein GI126695780 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.961343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTT TGCCAAGAAG ATTTGAACGA ATCAAAAGTG TTTTAGATTG CAGAATGAAA 
AACTTGACTG TTTTAGTTGA GGATGTCAAT AAACCACATA ATTTATCTGC GATATTAAGG 
ACATGTGATG CAGCAGGAGT TTTCGAAGCA AATTTTATTA GCAAAACGAA TGCCGTTAAG 
ACTTTTAATA GTACCGCTCA AGGAAGTCAA AAATGGGTAA AACTGAATAA TCATGAAAAC 
ACTATCACGG CAATATCTGA TTTAAAGAAT AAGGGTTTTA AATTATATGG AACAACTCTT 
AATAGTGAAT CAGTAGATTA TAGAAATTTT GATTATTCTC AAAATACATG TTTTGTTTTA 
GGAGCAGAAA AATGGGGACT AAGTAATGAA CTTAAATCAA TGGTTGATCA ATCAATTTTT 
ATACCAATGA GAGGTATGGT TCAATCTCTG AATGTTTCAG TTGCTGCTTC AATATTATTA 
TTTGAAGCTG TTCGCCAAAG AAAAAATAAA GGTATATTGC CAGCTAATGG AGAAGGATTA 
AACATGGATG AATATCAAAA AACACTTTTT GAATGGTGTT ACCCAGAATT AGCTGCAGTG 
TATAAAAAAT CAGCTAAAGA ATATCCAAAG TTGAATGATA ACGGAGAACT TGATCCTATT 
ACAGATAACT AA
 
Protein sequence
MSILPRRFER IKSVLDCRMK NLTVLVEDVN KPHNLSAILR TCDAAGVFEA NFISKTNAVK 
TFNSTAQGSQ KWVKLNNHEN TITAISDLKN KGFKLYGTTL NSESVDYRNF DYSQNTCFVL 
GAEKWGLSNE LKSMVDQSIF IPMRGMVQSL NVSVAASILL FEAVRQRKNK GILPANGEGL 
NMDEYQKTLF EWCYPELAAV YKKSAKEYPK LNDNGELDPI TDN