Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_02871 |
Symbol | lytB |
ID | 4911153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | + |
Start bp | 263760 |
End bp | 264956 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640159855 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001090511 |
Protein GI | 126695625 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACTC AAGCTTTTAG AAGATCCCTT CATCATTCTG ATAGATACAA TAGAAGGGGT TTCGATTCTC CAACAAAAAG AGCTCAAGCG TTAGAAGAAG CTTACCAAAG TGATTTGATA AGTTCTATTA GGGATAATGG TTTTACTTAT ACTAAAGGCA GACTAAATAT TAAGTTGGCG CAAGCCTTCG GTTTCTGCTG GGGAGTTGAA AGAGCTGTTG CAATGGCTTA TGAAACAAGA AGACATTATC CAAATGAGAA TATTTGGATA ACTAACGAAA TAATTCATAA TCCCTCAGTA AATGATCATT TAAGAAAGAT GAATGTAAAA TTCATTTCAG CTAAAAATGG AATTAAAGAT TTTTCTTTAG TTTCTAATGG GGATGTTGTT ATACTGCCTG CTTTCGGAGC TACTGTTCAA GAAATGAAAC TCTTGCATGA GAAAGGTTGT CATATAATTG ATACAACTTG TCCCTGGGTT TCTAAGGTTT GGCATACAGT TGAAAAACAT AAAAAACATG TTTTCACATC TATTATCCAT GGAAAGTTCA AGCACGAAGA GACTCTTGCT ACAAGTTCAT TTGCTGGTAA ATATTTAGTT GTACTTGATC TAGAAGAAGC AAACTACGTA TCTGAATATA TTCTGGGGAG AGGTAATAGA AATGAGTTTA TGAATAAATT TGCTAAAGCT TGTTCTAATG GATTTGATCC TGATAAAGAT TTAGAAAGAG TGGGTGTTGC AAATCAGACA ACTATGCTTA AGAGCGAGAC TGAGGAAATT GGAAAGGTTT TTGAAAGGAC GATGTTAAAA AAATTTGGAC CAGAAAACTT AAATAGTCAC TTTTTAGCTT TTAATACTAT TTGTGATGCA ACTGAAGAAA GACAAGATGC AATGTTCTCT TTGGTTGATG AAGATCTTGA TATTTTAGTA GTTATTGGAG GTTTCAATTC TTCCAATACT ACTCACTTAC AAGAAATAGC AATTACAAAA AATATTTCTT CTTTTCACAT TGACACGCCT GAGAGGATAT CAGTTAAGGA AAACTCAATA TTTCATAAAC CATTGGGATC GGAATTGGAA CTTAAAAATA ATTTTCTGCC TAGTGGAAAA ATTAATGTTG GAATAACCTC AGGAGCATCC ACTCCTGATA AGGTAGTTGC AGATGTTATT GAAAAGTTAA TTGATATTGC TTCCTGA
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Protein sequence | MDTQAFRRSL HHSDRYNRRG FDSPTKRAQA LEEAYQSDLI SSIRDNGFTY TKGRLNIKLA QAFGFCWGVE RAVAMAYETR RHYPNENIWI TNEIIHNPSV NDHLRKMNVK FISAKNGIKD FSLVSNGDVV ILPAFGATVQ EMKLLHEKGC HIIDTTCPWV SKVWHTVEKH KKHVFTSIIH GKFKHEETLA TSSFAGKYLV VLDLEEANYV SEYILGRGNR NEFMNKFAKA CSNGFDPDKD LERVGVANQT TMLKSETEEI GKVFERTMLK KFGPENLNSH FLAFNTICDA TEERQDAMFS LVDEDLDILV VIGGFNSSNT THLQEIAITK NISSFHIDTP ERISVKENSI FHKPLGSELE LKNNFLPSGK INVGITSGAS TPDKVVADVI EKLIDIAS
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