| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_01621 |
|---|
| Symbol | crtB,pys |
|---|
| ID | 4912564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 150282 |
|---|
| End bp | 151190 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640159728 |
|---|
| Product | squalene and phytoene synthase |
|---|
| Protein accession | YP_001090386 |
|---|
| Protein GI | 126695500 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1562] Phytoene/squalene synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAATT CAATTTCTCA ACTAGATCAA GCATACGAGA TATGCCGAAA AGAAACCCAA
AAGTGGGCTA AAACCTTTTA CTTGGGAACG CTTCTGCTAC CTGTAGAGAA AAGAAAAGCT
ATTTGGGCTA TTTATGTTTG GTGTAGAAGA ACAGATGAAA TAATGGATAG CTTAGAAGCT
TCAACTAAAT CGCAAGATGA ACTTACAGAA AATTTAAATG CATGGGAAGA AAATACAAGG
AATGTTTTTA AAGGCAACAT TAAATCGGAA TTAGATGCCG TTCTACTAGA CACCATAGAA
AAATATCCAC AAAGTATTCA ACCTTATCTA GACATGATAG ATGGCCAGAG AATGGATCTT
AATAAATTCA GATACAAAGA TTTTGATGAA TTAAAACTCT ATTGTTACAG AGTCGCAGGG
ACAGTTGGTT TGATGACTCA GAATGTCATG GGGATTGATA GCGCTTATAC ATCAGCCCCA
TGGAGTGCCA AACCTGACCC CTCAGAAGCC GCTATAGCTT TAGGTATAGC TAATCAATTA
ACAAATATAT TAAGAGATGT CGGCGAAGAT AGGCAAAGAG GTAGAATTTA TCTCCCTCAA
GAAGATATTG AAAAATTTAA TTATTCTGAA GAAAAACTTT TAAAAGGTGA AATAAACAAA
CAATGGAAAG CACTTATGAA CTTTCAATTA ACTAGAGCTC GCGATTGGTT CCAGAAATCT
GAAGATGGAA TCAAATGGTT ATCTTCCGAT GCAAGATGGC CTGTTTGGAC ATCCTTACGT
CTTTACAGAG GAATATTAGA TTCTATAGAA AGGCTAGACT ATGATGTCTT TAATAATAGA
GCTTTCGTAA AAAATTCAGT AAAAGCTTTT GAAATTCCAA TATCGTTTTT AATTTCTCGA
ATTAAATGA
|
|---|
| Protein sequence | MKNSISQLDQ AYEICRKETQ KWAKTFYLGT LLLPVEKRKA IWAIYVWCRR TDEIMDSLEA
STKSQDELTE NLNAWEENTR NVFKGNIKSE LDAVLLDTIE KYPQSIQPYL DMIDGQRMDL
NKFRYKDFDE LKLYCYRVAG TVGLMTQNVM GIDSAYTSAP WSAKPDPSEA AIALGIANQL
TNILRDVGED RQRGRIYLPQ EDIEKFNYSE EKLLKGEINK QWKALMNFQL TRARDWFQKS
EDGIKWLSSD ARWPVWTSLR LYRGILDSIE RLDYDVFNNR AFVKNSVKAF EIPISFLISR
IK
|
|---|
| |