| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_01471 |
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| Symbol | rpaA |
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| ID | 4912786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 136104 |
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| End bp | 136886 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640159713 |
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| Product | two-component response regulator |
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| Protein accession | YP_001090371 |
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| Protein GI | 126695485 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.37604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTT CAATTCTTTT AATTGAAGAC GATCGTGACA TGCGCGATCT GGTGGCTAGG
CATTTAGAAC ATTCTGGTTT CGATGTCCAA AAAGCTGAAG ATGGAATTAA AGGACAAGCA
TTAGCCCTTC AATATTCACC TGATTTAATA CTTTTAGATT TAATGCTACC AAGTGTTGAT
GGTTTAACTT TATGCCAGCG ACTAAGAAGA GATGAAAGAA CATCAAATAT ACCAATTTTG
ATGATAACTG CGTTAGGGGG TCTTAAAGAT AAAGTTACTG GGTTTAATTC TGGAGCAGAT
GATTACATTA CTAAACCATT CGATTTAGAA GAATTACATG TACGCATAAA AGCTCTATTA
AGAAGAACAA ACAGAGCACA ACTAAATTCT AGTAACCAGC AAGAAATATT AAATTATGGC
CCTTTAACTC TTGTTCCTGA AAGATTCGAA GCTATATGGT TTGAATCTCC TGTTAGATTA
ACTCATCTTG AATTTGAGCT TCTTCATTGT CTTTTGCAGA GACATGGCCA AACTGTATCA
CCAGCATTAA TTCTCAAAGA AGTATGGGGA TATGAACCTG ATGATGATAT TGAGACAATA
AGAGTTCATA TTAGACACTT GCGCACTAAA CTTGAACCCG ATCCACGAAA ACCTATTTAT
ATAAAAACTG TATACGGTGC TGGATATTGT CTCGAGTTAC CTATTGGTTC TCAAGTAGAA
ACTGCTAGGC AAGAGTTCAT TCAAGCAAGA AATCCTGACT TGATAAATTC TGCAGTAGAT
TAA
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| Protein sequence | MKISILLIED DRDMRDLVAR HLEHSGFDVQ KAEDGIKGQA LALQYSPDLI LLDLMLPSVD
GLTLCQRLRR DERTSNIPIL MITALGGLKD KVTGFNSGAD DYITKPFDLE ELHVRIKALL
RRTNRAQLNS SNQQEILNYG PLTLVPERFE AIWFESPVRL THLEFELLHC LLQRHGQTVS
PALILKEVWG YEPDDDIETI RVHIRHLRTK LEPDPRKPIY IKTVYGAGYC LELPIGSQVE
TARQEFIQAR NPDLINSAVD
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