| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_01151 |
|---|
| Symbol | nadB |
|---|
| ID | 4911108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | + |
|---|
| Start bp | 113223 |
|---|
| End bp | 114890 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640159680 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_001090339 |
|---|
| Protein GI | 126695453 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGGC CTCCATTTTC GCAAGAACCG ATACCAATAA ATAATTGGGA TGTAATCGTT
ATAGGCGCTG GAGCTGCTGG CCTTATGACT TGTCTTGAAT TACCCTCAAA TTTAAAAGTG
CTCCTTTTAA ATAGAAATAC TAGTAAGGCA TCTTCCAGTA GATGGGCTCA AGGCGGAATT
GCATCTGTTG TTAGACAAGA TGATTCATTT GATCTTCATG CTGAGGATAC TTTAAAAGCA
GGGGATGGAC TATGTGATTT TCAAGCTGTA GAAATGCTAG TTAAAGAAGC TCCAAGTTGT
GTAGAAAGGT TGCAGAATTT AGGGATGATT TTTGATCAAA GTTCTGATCA ACTAGCTACT
ACCTTGGAAG CAGCCCATTC GCGAAGAAGA GTTTTACATG TTAAGGATCG TACTGGACGA
GCATTAGTTG AAGTTCTAGA AGATCATATT GAGAATCAAA AAAATATTCT TCACTGCAGG
GGTGTAAGAG TAACTGAACT TCTCATTGAA AATAAAGAAT GTAGAGGAGT TCAGGTTCTT
GATGGAGCAA ATTTATATTG GATTAAATCT AGAGCTGTTG TTTTGGCTAC AGGTGGGGGT
GGGCACTTAT TTACAAATAC AACAAATCCT TCTCAATCCT CTGGTGAAGG GATTGCTCTT
GCATGGAAAG CAGGAGCTGC TATCGAAGAT TTAGAGTTCG TACAATTTCA TCCAACAGCT
TTAAAATTTT ACGGTGCACC TTGCTTCTTA ATATCTGAGG CCCTTAGAGG GGAGGGAGCG
ATTTTAGTTG ATAAAAATGG TGACAGTCCA GTTAAAAATC TTGAAAATCG TGATCTAGCT
ACTAGAGATC AGGTAAGTAG AGCAATTATG AAAAATATGC ATGATAATGA TGAAGATCAT
GTTGGCTTAG ATCTTCGGTA TATTGACCCA GAAAAAATTG TAGAGCGCTT CCCCACGATT
TTAAGTCGAT GTCAGGATTA TGGCGTTAAC CCTTTAAATG AGGTTATTCC TGTAGCTCCT
GCAGCTCATT ATTGGATGGG AGGTGTTAAA ACTGATCTAA ATGCATCTTC AACAAGAAAA
GGATTATATG CCGTTGGAGA AGTTGCTTCT ACAGGTGTGC ATGGTGCTAA TAGACTGGCA
AGTAATTCGC TGATGGAGTG TCTTGTTTTC GCAAGAAAAA TGTCTTCAAT TGTTTTGAAT
GACTTTTCTA AAGTTGAAAA ATTTGATAGA TCATTTCAAG AGTTTGATAT TGAAGATCCT
ACAGAAGATC AAATTTCTAT AATTACTGAA AAAATTGATG AACTAAGAAA ACTATGCTGG
TTAAATTTAG GTGTATCTCG AAATAAGGTA AATATGAGTA AATTTTTAAA TTACATTCAA
AATGATATAG ATAAATTAAA TAAAAATGAT TTACTAAATA GTCTTGAAAA AATAAAATTT
GATCAAAAAA TAAAACTTAG TGAACGCAAT AGAAGAACAT TAAATCTTTT ACTTGATTTA
AAGAATAGAC AAATAACCAC CATAACTTTA TTAAAAGCTT GTCTATTTAG AAAGGAAAGT
AGAGGAGGGC ATTATAGAGA TGATTTCCCT GATAAAGATA AAAATTGGGA ATGCCATACT
AGACAACAGT TAGATCAAAA AATTCAAAAA AGATTTATTA AAAATTAA
|
|---|
| Protein sequence | MLRPPFSQEP IPINNWDVIV IGAGAAGLMT CLELPSNLKV LLLNRNTSKA SSSRWAQGGI
ASVVRQDDSF DLHAEDTLKA GDGLCDFQAV EMLVKEAPSC VERLQNLGMI FDQSSDQLAT
TLEAAHSRRR VLHVKDRTGR ALVEVLEDHI ENQKNILHCR GVRVTELLIE NKECRGVQVL
DGANLYWIKS RAVVLATGGG GHLFTNTTNP SQSSGEGIAL AWKAGAAIED LEFVQFHPTA
LKFYGAPCFL ISEALRGEGA ILVDKNGDSP VKNLENRDLA TRDQVSRAIM KNMHDNDEDH
VGLDLRYIDP EKIVERFPTI LSRCQDYGVN PLNEVIPVAP AAHYWMGGVK TDLNASSTRK
GLYAVGEVAS TGVHGANRLA SNSLMECLVF ARKMSSIVLN DFSKVEKFDR SFQEFDIEDP
TEDQISIITE KIDELRKLCW LNLGVSRNKV NMSKFLNYIQ NDIDKLNKND LLNSLEKIKF
DQKIKLSERN RRTLNLLLDL KNRQITTITL LKACLFRKES RGGHYRDDFP DKDKNWECHT
RQQLDQKIQK RFIKN
|
|---|
| |