| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_00941 |
|---|
| Symbol | |
|---|
| ID | 4911222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | + |
|---|
| Start bp | 96774 |
|---|
| End bp | 97967 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640159659 |
|---|
| Product | putative NADH dehydrogenase, transport associated |
|---|
| Protein accession | YP_001090318 |
|---|
| Protein GI | 126695432 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.718814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA TACAAAAACC AATAGTAATA GTTGGAGCAG GTTTTGCAGG CATGACATTT
GCTTTGAGTT TAAAAAATCT TTATCCCTCT TTACCGATTC TTGTGGTTGA TTCTGAACCT
AACTTCATAT TTAAACCTTT AATGTATGAA GTTTTAAGCA AAGAAATAAG AAGTTGGGAA
GCCACCCCAA AATTTGCAAA TATTTTTTCT GATGCTGGTA TAACTTTTTT AAGAAATTGT
TTAACCAAGA TTTCCTTCAA AGATAGTATT CTTGAATTTA GTGACGAATT AAAATTAAGT
TATCAGTATC TCGTTATCTG TACAGGATCT ATTCCAAATA GTTTTTTTAT AAAAGGTGTA
GATGAAAATT GTTATTTTTT TAATGATGTT CACGATTTAA ATAAATTAAA TTCTTTTTTA
AAAGAATCAC AAGATACTGC GTCGCATAAA AAGTTATTCA TAGTGGGAGG TGGTCCCTCT
GGCATCGAGT TGGCATGCAA AATTAAAGAT ATATATACAG ACCAATTTGA AATTAATGTA
ATAGAAAAAT CAAATGAAAT CCTAAATAAA AACAAAATTT TTAATAGAGA ACAATCAGAG
AAGGCATTAG AAAAAAGAAA AATCAATGTT ATTTTGAATT CCACAGTTAA AGAAGTCTCA
GAAACTAAGA TTAGTATTTC TAGTGAGGTT GGAATAACTT CCTTGGATAA AGATATTGTT
ATTTGGACAG CAGGAGTTAA ACCTAATTTG TCTTTCTTAG AAACGGATCA AATAACAAAA
AAATTTGGAC GAATTTTAGT CAATAATAAT TTGCAAATAG AAAACCATAA AAACTGTTTT
GCTATTGGTG ATATTTCAGT TATTGAAGGA ATGGAGGATT TACCCATAAC TGCTCAGGTC
GCTATGCAGG AAGGAAATCA TCTTGCTAAT AATTTTGAAC TTTTAATTCA AGGAAAAGAT
TCGTTACCCT TTGAATTTCA AGACAATGGT GAAATGATTA GCTTAGGAAT AGGCGAAGCT
TCAATTTCTG GACTAGGGGT TACTTTATCT GGGAAATTGG CTTTTGAGGC AAGAAGGCTT
ATATATGCTT CAAAATTGCC TGATATTACA GAAAGCTTAA AATCTGCATC TTCATGGATA
TTCGAAAAAA AATCTATTTT TAAAAAGTTT CTTAAAAAAG ATTATTCAAA TTAA
|
|---|
| Protein sequence | MKSIQKPIVI VGAGFAGMTF ALSLKNLYPS LPILVVDSEP NFIFKPLMYE VLSKEIRSWE
ATPKFANIFS DAGITFLRNC LTKISFKDSI LEFSDELKLS YQYLVICTGS IPNSFFIKGV
DENCYFFNDV HDLNKLNSFL KESQDTASHK KLFIVGGGPS GIELACKIKD IYTDQFEINV
IEKSNEILNK NKIFNREQSE KALEKRKINV ILNSTVKEVS ETKISISSEV GITSLDKDIV
IWTAGVKPNL SFLETDQITK KFGRILVNNN LQIENHKNCF AIGDISVIEG MEDLPITAQV
AMQEGNHLAN NFELLIQGKD SLPFEFQDNG EMISLGIGEA SISGLGVTLS GKLAFEARRL
IYASKLPDIT ESLKSASSWI FEKKSIFKKF LKKDYSN
|
|---|
| |