Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_00511 |
Symbol | gatB |
ID | 4912071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | + |
Start bp | 55606 |
End bp | 57051 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640159615 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_001090275 |
Protein GI | 126695389 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.259436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTGGTT TGGAAACTCA TGTACAGCTT AATACTAAAA GTAAAATATT CACATCTGCG TCAACAGCTT TTGGTGATGC ACCTAATACG CATATAGATC CTGTAGTTTG TGGGTTACCA GGAACACTTC CAGTTTTGAA TGAGACTGTT CTTGAGTATG CTGTAAAAAC TTCGTTAGCA TTAAATTTAA ACGTTGCTGA ATATTGTAAA TTTGATAGAA AACAATATTT TTATCCTGAT CTACCTAAAA ATTATCAAAT TTCACAATTT GATGAGCCAC TAGCTGAAAA TGGCTGGTTA GAGGTTGAAA TAATTGAAAA GGACAAAGAA CCTTATATCA AAAAAATTGG TATAGAAAGG TTACATATGG AAGAAGACGC CGGAAAACTA GTTCATTCAG GAAGTGATAG ATTAGCTGGC TCTAAGTATT CTTTAGTAGA TTACAATCGT GCCGGAATAG CACTTTGTGA GATTGTAAGT AAACCGGATA TTAGATCAGG TAAAGAGGCA TCTGAATATG CTTCAGAGAT CAGAAGAACA GTTAGATATC TAGGAGTATC AGACGGAAAT ATGCAAGAGG GTTCATTACG CTGTGATGTC AATATTTCAG TTAGAAAAGG ACCTAATGCT CCTTTCGGCA CCAAAGTGGA AATAAAAAAT ATGAATTCAT TTTCTGCAAT TCAAAAGGCT TGTGATTATG AAATAGCTAG ACAAATAGAA GTTTATGAAA ATGGAGGAAA AATTTTCCAA GAAACAAGGT TATGGGACGA ATCTAAGCAA TTAACGAAAA GTATGAGATT AAAAGAAGGT AGCAGTGATT ATAGATATTT TCCTGATCCT GACTTAGGTC CAATTGAAAT AACAAAAGCC CAACAAGAAA TATGGTTTAA AGAACTACCA GAATTACCTT CAAAGAAAAG AAATAAATAT GTAAGTCAAT TTGGGTTGTC TGCATATGAT GCAAGGGTAA TTTCTGATGA AATAAGTATG GCAAATTTTT TTGAAGAAAC AGTAGCAAAT GGCGCTGAGG CCAAACTAGC TTCAAATTGG GTAACAAGTG ATATTGTGGG CTATTTAAAA TCAAACAAAC TAAGTTTTAG TGAATTAAAG CTTAGTCCTG AAAATCTTGC TGAAATGATT AGCATGATTT CAAAAAATAT AATTAGTGGA AAAATTGCAA AAGAAATTTT ACCTGAACTT ATTCAAAAAA ATATTTCTCC GAAAAAATTA GTTGAAGAAA AAGGGTTGGC AATGATATCT GATTCTTCAA GTATATTACC AATAATTGAT GAACTTTTAA ATGAACATCC AAATGAAGTT CAAGCATTTA AAAATGGCAA AACTAAGTTA CTTGGTTTTT TTGTTGGTCA ACTTATGAAA AGAACAAAAG GTAAAGCTGA CCCTAAACTT GCAAATAAAC TTCTTATGGA AAAATTAAAT AATTAA
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Protein sequence | MIGLETHVQL NTKSKIFTSA STAFGDAPNT HIDPVVCGLP GTLPVLNETV LEYAVKTSLA LNLNVAEYCK FDRKQYFYPD LPKNYQISQF DEPLAENGWL EVEIIEKDKE PYIKKIGIER LHMEEDAGKL VHSGSDRLAG SKYSLVDYNR AGIALCEIVS KPDIRSGKEA SEYASEIRRT VRYLGVSDGN MQEGSLRCDV NISVRKGPNA PFGTKVEIKN MNSFSAIQKA CDYEIARQIE VYENGGKIFQ ETRLWDESKQ LTKSMRLKEG SSDYRYFPDP DLGPIEITKA QQEIWFKELP ELPSKKRNKY VSQFGLSAYD ARVISDEISM ANFFEETVAN GAEAKLASNW VTSDIVGYLK SNKLSFSELK LSPENLAEMI SMISKNIISG KIAKEILPEL IQKNISPKKL VEEKGLAMIS DSSSILPIID ELLNEHPNEV QAFKNGKTKL LGFFVGQLMK RTKGKADPKL ANKLLMEKLN N
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