| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_17561 |
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| Symbol | |
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| ID | 5730626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 1580800 |
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| End bp | 1581807 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641286141 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001551641 |
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| Protein GI | 159904297 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.041437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTC AAGCGGAAAT TACTTCATCA AGAAAAATCA TCCCAGTAAC ACTGGAAAAA
TCTACATCTG ATAATGATCT AATTCGTTCC TATTTAAGGG ATATAGGACG TGTTCCGCTC
TTGTCCAATG ATCAGGAAAT CACTCTTGGC CGTCATGTTC AAGAGCTCAT GGCTTTAGAG
AATCTTGAGA AGGACTGGCA AAGTACTCAT GGTCAGAAGC CCAATCTTGA CGAGTTGGCA
AGTGCTGCAG GATTGACAGT TGGAGCTTTG AAAAAAAAGT TTCGCTTAGG TGAGCGGGCG
AAAGAAAGAA TGGTTGCAGC TAATTTGCGT TTGGTAGTTA GTATTGCCAA GAAATATACA
AAAAGGAATA TGGAACTCTT GGATTTAATC CAAGAAGGGA CAATTGGTTT GGTGAGAGGA
GTAGAGAAGT TTGATCCTGC CCGTGGCTAT AAATTTTCAA CTTATGCTTA TTGGTGGATT
AGACAAGGAA TTACAAGAGC TATAGCTGAA AAAAGTAGGG CTATTCGTTT GCCTATTCAT
ATTACTGAGA TGCTTAATAA GTTGAAGAAA GGACAGAGAG ACTTAAGTCA ACAATTATCA
AGGACACCTT CTGTTGCAGA ACTTGCAGAA TATATAGATG TATCTGAGGA AGAAGTCAAA
GATTTGATGC TTAAGGCCAG TCAGCCAGTC AGTTTAGAGA TGAAAGTAGG TGATAAAGAT
GACACTGTTT TATTAGATTT GTTATCTACT GATAATGATT CGCCACAACA GCAGATTGAG
TTGGATTGCA TGAAAGGTGA TTTGGAAATC CTCTTGGAAA AATTGCCTGA GTTGCAATAC
AGGGTGTTAA GGATGAGATA TGGCATAGAT GGTGAGGAAC CGATGAGCCT TACAGGTATT
GGTAGGGTTC TTGGTATAAG TAGAGATCGA GTAAGAAACC TTGAGCGTTC TGGGTTAAGA
GGTTTAAGAA GCAAAGGAGA GGCCGTTGAA GCTTATGTCG CATCTTGA
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| Protein sequence | MAVQAEITSS RKIIPVTLEK STSDNDLIRS YLRDIGRVPL LSNDQEITLG RHVQELMALE
NLEKDWQSTH GQKPNLDELA SAAGLTVGAL KKKFRLGERA KERMVAANLR LVVSIAKKYT
KRNMELLDLI QEGTIGLVRG VEKFDPARGY KFSTYAYWWI RQGITRAIAE KSRAIRLPIH
ITEMLNKLKK GQRDLSQQLS RTPSVAELAE YIDVSEEEVK DLMLKASQPV SLEMKVGDKD
DTVLLDLLST DNDSPQQQIE LDCMKGDLEI LLEKLPELQY RVLRMRYGID GEEPMSLTGI
GRVLGISRDR VRNLERSGLR GLRSKGEAVE AYVAS
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