Gene P9211_16521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_16521 
SymbolrplM 
ID5730742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1489670 
End bp1490182 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content39% 
IMG OID641286032 
Product50S ribosomal protein L13 
Protein accessionYP_001551537 
Protein GI159904193 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type
[TIGR01077] ribosomal protein L13, archaeal/eukaryotic 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0797487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAA AAGTTCTGTT TTTTATAAAA CAGATGTATT TGCCAATCCG GTATGCCGGC 
GAGATGAACA AGACAATTAC CCCAAAGATC GACGCAATCG ACCGCCAATG GTACTTGGTT
GATGCAGAGA ATCAGACTCT TGGTCGACTT GCAAGTAAAA TTGCATCAGT ACTTAGAGGT
AAAAACAAGC CAAATTTCAC GCCTCATTTA GATACAGGAG ATTTTGTTGT TGTTGTTAAT
GCAGAGAAGA TTCAAATTAG TGGCAAAAAA AGCCAGCAAA AACTTTATCG TCGTCATTCA
GGTCGGCCAG GCGGAATGAA AGTGGAAACC TTCAACTCTT TACAAGAAAG GATTCCTGAA
AGAATTGTTG AGAAAGCAGT CAAAGGAATG CTCCCTCACA ATTCTTTAGG CAGACAATTG
TTCAGAAAAT TGAAGGTTTA CAAGGGCGCT GATCATCCAC ATGCTGCTCA AGAACCTAAG
CTTCTAAATC TTGATACCAA CGGATTAATT TAA
 
Protein sequence
MFKKVLFFIK QMYLPIRYAG EMNKTITPKI DAIDRQWYLV DAENQTLGRL ASKIASVLRG 
KNKPNFTPHL DTGDFVVVVN AEKIQISGKK SQQKLYRRHS GRPGGMKVET FNSLQERIPE
RIVEKAVKGM LPHNSLGRQL FRKLKVYKGA DHPHAAQEPK LLNLDTNGLI