Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_16111 |
Symbol | rpiA |
ID | 5731124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 1442638 |
End bp | 1443351 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641285989 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_001551496 |
Protein GI | 159904152 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGATT TGCAAACTCA AATGAAAGAG GCTGTTGCTA AAGCAGCTAT TGAGCAAATT CACGATGGGA TGGTTCTAGG ACTTGGCTCA GGATCAACCG CTGCCTTAAT GATTAAAGCC TTAGGGGCAA AGATCTCGTC AGGTCATCTC AAAGATATTG TTGGAGTGAC AACTTCGTTT CAAGGAGAAG TCCTTGCAAC TGAACTTGGC ATTCCTTTAC AAGGTCTATC AGCTGTCTCG CAAATTGATT TAGCAATAGA TGGTGCTGAT GAAGTTGATT CTAATTTTCA ATTAATTAAA GGCGGTGGTG CTTGCCATGT TCAAGAAAAA CTTGTTGCTT CTTTGGCTGA GCGTTTTGTA GTGGTTGTTG ATTCCAGTAA AATTGTTAAG ACTCTAAATC TCACTTTTAA ACTGCCTGTA GAAGTTTTGC CTTCAGCTTG GCAATTGGTG AAAAATAAGA TTCACGAAAT TGGCGGAGTA AGTCAGCTTC GAATGGCGCA AAAGAAAGCC GGTCCAATTG TCACAGATCA GGGGAATTTG GTTTTAGATG TAACTTTTGC AGGTGGTATA AACGACCCTC AAACCCTTGA AAAGCAAATC AATAATATAC CTGGTGTCCT TGAAAATGGC TTATTCGTTA ATCTTGCAGA TGAGGTATTA GTTGGAGAAA TTGTATCTGG AACCCCAGGT GTTAAATCTC TTCAGAAGAT TTAG
|
Protein sequence | MEDLQTQMKE AVAKAAIEQI HDGMVLGLGS GSTAALMIKA LGAKISSGHL KDIVGVTTSF QGEVLATELG IPLQGLSAVS QIDLAIDGAD EVDSNFQLIK GGGACHVQEK LVASLAERFV VVVDSSKIVK TLNLTFKLPV EVLPSAWQLV KNKIHEIGGV SQLRMAQKKA GPIVTDQGNL VLDVTFAGGI NDPQTLEKQI NNIPGVLENG LFVNLADEVL VGEIVSGTPG VKSLQKI
|
| |