Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_14521 |
Symbol | |
ID | 5730071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 1306606 |
End bp | 1307271 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641285830 |
Product | Short-chain dehydrogenase of various substrate specificities |
Protein accession | YP_001551337 |
Protein GI | 159903993 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00861762 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTCTACTT ACTTAATAAC AGGCTCTAAC CGAGGACTTG GATTAGAGTA CTGTCGGCAG TTGAAAAAAA GAGGAGATAA TGTTATTGCA ACATGCAGGA CTTCATCTGC AGATTTAGAT GATCTTGGTG TAAGAGTTGA ATCTGGAGTT GATATAACTT CAGGTGCATC AGTTCTAACG CTTAAGAAAA AATTAGAAGG TATTAATATA GACATATTAA TTCAAAATGC TGGGATAGCA GAGTTTAATT CTTTGTCAAA TCTTGACCCA CAAAGTGTTA CCCGCCAATT TGAAGTTAAT GCATTGAGCC CTTTATGTTT TACTCATGCA TTTCTTGAAA ATATGAGTAA AGGTTCAAAA GTTGTCTTTA TGACAAGTCG AATGGGATCT ATAGATGACA ATACTTCAGG GGGCTCTTAT GGATACAGGA TGTCCAAAGT TGCGCTTTGT ATGGCTGGCA AATCTTTATC TATTGACTTA AAGCCAAATG GCATAGCTGT TGCTCTCTTG CACCCTGGAT TGGTAAGTAC TCGAATGACA GGTTTTACTC CCAATGGGGT GTCACCTCAG GAATCTGTAA TTGGCCTTCT TTCAAGGATT GATTCATTGA CACTTGATAA TTCAGGAACT TTTTGGCATT CAAATGGGGA AGAACTCCCT TGGTAA
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Protein sequence | MSTYLITGSN RGLGLEYCRQ LKKRGDNVIA TCRTSSADLD DLGVRVESGV DITSGASVLT LKKKLEGINI DILIQNAGIA EFNSLSNLDP QSVTRQFEVN ALSPLCFTHA FLENMSKGSK VVFMTSRMGS IDDNTSGGSY GYRMSKVALC MAGKSLSIDL KPNGIAVALL HPGLVSTRMT GFTPNGVSPQ ESVIGLLSRI DSLTLDNSGT FWHSNGEELP W
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