| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_12331 |
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| Symbol | psbD |
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| ID | 5730366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 1108607 |
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| End bp | 1109683 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641285601 |
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| Product | photosystem II PsbD protein (D2) |
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| Protein accession | YP_001551118 |
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| Protein GI | 159903774 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B))
[TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.153207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATAG CTGTTGGTGG CGCCCAAGAA AGAGGATGGT TTGACGTCCT TGATGACTGG
CTTAAGCGCG ACCGATTCGT ATTTGTTGGT TGGTCTGGTC TTCTACTTTT TCCTACTGCC
TATTTGGCAA TAGGGGGGTG GTTCTTAGGC ACAACCTTTG TTACTTCCTG GTACACACAT
GGTGTAGCCA GCTCTTACCT AGAAGGTTGT AATTTTCTTA CAGCTGCAGT TAGCACCCCT
GGTGATGCCA TGGGTCATAG CCTTCTATTC CTTTGGGGAC CTGAGGCACA AGGCAGTCTT
GTTCGTTGGT TACAACTTGG CGGTCTATGG AACTTTGTAG TTCTCCATGG AATATTTAGC
CTTATAGGCT TCATGCTTCG TCAATTTGAA ATCGCAAGAC TTGTTGGAAT TCGTCCCTAC
AACGCTCTTG CATTTTCTGC TGTAATTGCC GTTTATACAG CTTGCTTCCT TATATACCCA
CTAGGTCAGC ACAGCTTTTT CTTTGCTCCT TCTTTTGGGG TAGCAGCAAT TTTCCGCTTC
ATCCTCTTTA TTCAAGGTTT CCATAACATC ACTCTTAACC CATTTCACAT GATGGGAGTT
GCGGGAATTC TTGGAGGTGC GCTTCTTTGT GCAATTCATG GAGCCACTGT GCAGAACACT
CTGTATGAGG ACACGAGTAT TTATACGGGT GGCAAAGCTC AAAGTACTAC TTTTAGAGGT
TTTGACCCAA CTCAAGAAGA AGAGACCTAC TCCATGGTTA CTGCTAATCG CTTTTGGAGT
CAGATCTTTG GAATTGCCTT CTCAAACAAG CGCTTCCTTC ATTTCTTAAT GCTCTTCGTA
CCTGTAATGG GTATGTGGTG CGCTGCTATT GGCATCGTTG GTTTAGCCCT AAACCTAAGG
GCCTATGACT TTGTTAGCCA AGAAATTCGC GCTGCTGAAG ACCCTGAGTT TGAAACGTTC
TATACCAAAA ACATTCTTTT AAATGAAGGT ATGAGAGCCT GGATGTCTTC TGTGGATCAG
CCACACGAAA ACTTTGTATT CCCTGAGGAG GTACTCCCAC GTGGAAACGC CCTTTAA
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| Protein sequence | MTIAVGGAQE RGWFDVLDDW LKRDRFVFVG WSGLLLFPTA YLAIGGWFLG TTFVTSWYTH
GVASSYLEGC NFLTAAVSTP GDAMGHSLLF LWGPEAQGSL VRWLQLGGLW NFVVLHGIFS
LIGFMLRQFE IARLVGIRPY NALAFSAVIA VYTACFLIYP LGQHSFFFAP SFGVAAIFRF
ILFIQGFHNI TLNPFHMMGV AGILGGALLC AIHGATVQNT LYEDTSIYTG GKAQSTTFRG
FDPTQEEETY SMVTANRFWS QIFGIAFSNK RFLHFLMLFV PVMGMWCAAI GIVGLALNLR
AYDFVSQEIR AAEDPEFETF YTKNILLNEG MRAWMSSVDQ PHENFVFPEE VLPRGNAL
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