Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_11191 |
Symbol | ispA |
ID | 5730513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 1022779 |
End bp | 1023681 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641285487 |
Product | polyprenyl synthetase |
Protein accession | YP_001551004 |
Protein GI | 159903660 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.646183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGAAG CGGTCATTTC ATCTTTTGAC TTTGCCGCTT ATCTGGCTAA GGAGAAGATT CGTGTGGAAG CAGCTCTAGA TGCTTCTCTT GGTCCAGAGC GTCCAAAGCA ATTAAGGGAA GCAATGAGGT ATTCCCTTCT GGCAGGAGGG AAAAGGTTAA GACCTATTCT TTGTTTGGCA GCGTGTGAAC TTATAGCAGG CGAATCTGAA ACGGCTTTAC CTACAGCAGT AGCTATAGAA ATGATTCACA CAATGTCTCT TATTCATGAT GATTTGCCAT CTATGGATAA CGATGATTTA AGAAGAGGAC GGCCGACTAA TCACAAAGTA TATGGGGACG CTTTAGCAAT TCTTGCCGGG GACGCTTTGT TAACACGCGC TTTTGAGATG GTTTCACTAA GAAGTCCTGG GATATCTGCA GAAAGACTTA TTAAAGTTGT TGGTGAACTC TCATTAGTTG CTGGAGCGCC TGGCTTAGTG GGAGGCCAGG TGGCAGATCT TGAGTGTGAG GGTAAGGATG TTGATATAGA TACTCTTGAA TATATTCACA TCCATAAAAC TGGAGCGCTT CTAAAGGCAT CAGTTGTTTG CGGAGCTCTT ATTGGGGGTG CAAAAGATGA TTTGCTTGAT GCTCTTAGAA CTTATGCTGA AGCCATAGGC TTGGCATTTC AAATTATTGA TGACATCTTA GATGTGACTT CAAGTAGTGA AGTTCTCGGC AAAACAGCTG GTAAGGATTT AATTGCAGAC AAAACTACTT ATCCCAAGTT GTTAGGTGTA GACGAATCTC GTCAGAGAGC GAAAGTGCTT ATAGAAAAAG CTAAGAGTGT CTTGGAACCC TGGGAAGATG ATGCAACCCC TTTGCTTGCC TTGGCTGACT ACATTATTAG TAGAGATAGA TGA
|
Protein sequence | MSEAVISSFD FAAYLAKEKI RVEAALDASL GPERPKQLRE AMRYSLLAGG KRLRPILCLA ACELIAGESE TALPTAVAIE MIHTMSLIHD DLPSMDNDDL RRGRPTNHKV YGDALAILAG DALLTRAFEM VSLRSPGISA ERLIKVVGEL SLVAGAPGLV GGQVADLECE GKDVDIDTLE YIHIHKTGAL LKASVVCGAL IGGAKDDLLD ALRTYAEAIG LAFQIIDDIL DVTSSSEVLG KTAGKDLIAD KTTYPKLLGV DESRQRAKVL IEKAKSVLEP WEDDATPLLA LADYIISRDR
|
| |