Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_10061 |
Symbol | ddpX |
ID | 5730039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 898394 |
End bp | 899128 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641285373 |
Product | D-ala-D-ala dipeptidase |
Protein accession | YP_001550891 |
Protein GI | 159903547 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.331576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.504812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTAAGAC CTTGGCATCA GATACCTATC TCTGCCTCTA AAGATCCTCT GGTAGAAATA CCATTTAGAT TATTGCGTTT AGAGCCTCAT CCATATCTTT CTTTAGGTGC TCCTTACGCT AACGGATCCT CTCCGTGGAG ACTGAGGTCC AAGGTTATTG ATAGGTTATT TTTAGCCCAA GATCTTCTAA AAAATACCAA TTCTGAGCTT CAACTTGCTA TTTTTGACGC CTGGAGACCA TTGGCTGTAC AAAAATTTAT GGTTGAATAT TCGATTCAAA GAGAATGTCT TAACCAAGCA ATTTCTTTTT CAGATAGTAA TTATTCATCG AAATATCAAG AAATAGTTGA TCAAGTTCAA AAGTTTTGGG CACCACCAAG TACTAATCCA TTAACACCAC CCCCACATAG CACTGGCGCA GCAATTGATA TCACATTAGC TACCTCTAAT GGTCTTCCTA TTGACATGGG TGGGGCTATT GATGAGATTG GAGACATTTC AATGCCTAAT CACTATTCAC AATCAGCGAA GACTAACCCT AATTCTATCT CAGCAACTTG GCATTCCAGA AGACTTTTAT TGCACGAGAT GATGAGCAGC GCTGGTTTTG TACAGCATCC AAATGAATGG TGGCATTTTA GTTATGGAGA TCAACTATGG GCATGGAAAA ATAATTCAGC AAATGCCTTT TATGGCTCCT TGTCTTTTAG TGATAGTAAC TCCATTATAT TTTGA
|
Protein sequence | MLRPWHQIPI SASKDPLVEI PFRLLRLEPH PYLSLGAPYA NGSSPWRLRS KVIDRLFLAQ DLLKNTNSEL QLAIFDAWRP LAVQKFMVEY SIQRECLNQA ISFSDSNYSS KYQEIVDQVQ KFWAPPSTNP LTPPPHSTGA AIDITLATSN GLPIDMGGAI DEIGDISMPN HYSQSAKTNP NSISATWHSR RLLLHEMMSS AGFVQHPNEW WHFSYGDQLW AWKNNSANAF YGSLSFSDSN SIIF
|
| |