Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_08461 |
Symbol | salY |
ID | 5730762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 740141 |
End bp | 741370 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641285210 |
Product | putative ABC transporter |
Protein accession | YP_001550731 |
Protein GI | 159903387 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.825972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00227994 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAGCA AAGTATCAGT TAAAGAAACA TTGATAATGT CCATTCGGAC ACTTAAATCG AATAAGTTAA GAAGCCTATT AACAATGCTT GGAATTGTAA TTGGGAATGC TTCTGTAATT ACTTTAGTAG GAGTTGGCAA AGGCGCTCAA AATCTTGCTT CTAACCAGTT AAGTAATCTA GGAGCCAATG TACTTTTTAT AGTTCCAGGG AATAATGACA CTAGACGTAG AGGTGTTGCA TTCCCAAAGA ATCTTGTCTT AAAAGATGCA GAAGCTATAA AAGAACAGGT ACCTTCTGTT AAAAGAGTCG CTCCACAAAT TTCATCAAGT GAAGTGGTTC AATATAAATC AAAAAGCTTT AGCTCTTCAA TTCTAGGTAT AACTCCTAAT TTCCTTCAAG TCCGAAGTTT TGATATCGCT AATGGGAGAT TCATTACTAA AGAAGATTTA AAGTCAGCAA GAAATGTAGC TGTAATAGGT TCCGATCTTA ATAAAGACCT TTTTATGAGA AATCAGGCTA TAGGAAAAAA ATTAAGAATA AAGGACCAAT CATTTGAAAT TATCGGTATT ATGGAACCTA AAGGTGCCGT ATTCGGAAAT AACCAAGATA AGAATGTGTA TATACCATTA AACACAATGG TTAATAGAAT CTCCGGGAAG GACCCTACTT ATGGAATCAG TTTAAGCTTT ATAAGTATTG AAGCTCTTAA TGAACAGTCA ATTAACAAAG CAAAGTTTCA AATAACCAAT CTACTTCGTC AAAGACATAA GATAACTAAG GATGATGACT TTGCTGTTAG ATCTCAAAAA GATGCACTAA ATATTGTATC AAATATTACT GGTGGGCTTA CATTAATGCT GGCGGCTATA GGAGGAATAT CATTAATAGT AGGTGGGATT GGTATTATGA ACATAATGCT AGTTTCTGTA AGTGAACGAA CAGAGGAAAT AGGTTTAAGG AAGGCCCTAG GTGCAAGAAG CTCAGATATA TTAATTCAAT TTTTAATAGA GTCTCTTATT CTCTCTATAT TAGGTGGGCT AATTGGAACT TTGGTAGGCG TTAGTTCTGT AGGCGCTGTA GCTTTAATCA CTCCATTACC AGCTCAAATA GGTGCGAAGG TAATTATGCT AACTGTCTCC TTATCAGGAT CTATTGGATT AGTTTTTGGT GTATTACCAG CTAGAAGAGC TGCGAGGCTT GACCCAATTG TAGCTCTAAG AAGCCTATAA
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Protein sequence | MASKVSVKET LIMSIRTLKS NKLRSLLTML GIVIGNASVI TLVGVGKGAQ NLASNQLSNL GANVLFIVPG NNDTRRRGVA FPKNLVLKDA EAIKEQVPSV KRVAPQISSS EVVQYKSKSF SSSILGITPN FLQVRSFDIA NGRFITKEDL KSARNVAVIG SDLNKDLFMR NQAIGKKLRI KDQSFEIIGI MEPKGAVFGN NQDKNVYIPL NTMVNRISGK DPTYGISLSF ISIEALNEQS INKAKFQITN LLRQRHKITK DDDFAVRSQK DALNIVSNIT GGLTLMLAAI GGISLIVGGI GIMNIMLVSV SERTEEIGLR KALGARSSDI LIQFLIESLI LSILGGLIGT LVGVSSVGAV ALITPLPAQI GAKVIMLTVS LSGSIGLVFG VLPARRAARL DPIVALRSL
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