Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_08271 |
Symbol | |
ID | 5731323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 728489 |
End bp | 728995 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641285191 |
Product | hypothetical protein |
Protein accession | YP_001550712 |
Protein GI | 159903368 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.125475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000413407 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCTAT TACATGAATA TCTAAAAAAC CCAAGAGTAA GGAAGGTTTT AAGTTCTAAG CCTGGTAACA AAGGCTTTTC ATTAGTTGAG CTTGTTGTTG TAATTGCAGT TCTGGCGATT TTGTCAGCAG TAGCAATCCC AAACTTTATA TCAGTCCAAT CAAAGGCTCA AATTTCCGCT GTTAAGAATG GCTTGGTTAA CGGTATTAAA GAATGTGTAG TAGCTTATCT AGATGATCCT GAAAATATAC CGGAATTTGC TGAGATAAAT GCCTTTAATG GTGATTACAC AGGATACGCA ATAGAACCTT TAGCGGAAGA TCAAGAGGGA TGTTTTGAAG CTGAAGGTAT ACACGCCGCC GGAGTTCTTC CAACTTTTGC AATTACGTAT GATCAGGCCA CTGGAGAAAT TGTAAAAGAA TGCGATGGAG CTGATGAGGA AGGTGCGAAT GAATACCTTA CATGTATAGA GCCTCAGGGA GAAGGCAATA ACCAATGGAC CTGGTAA
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Protein sequence | MNLLHEYLKN PRVRKVLSSK PGNKGFSLVE LVVVIAVLAI LSAVAIPNFI SVQSKAQISA VKNGLVNGIK ECVVAYLDDP ENIPEFAEIN AFNGDYTGYA IEPLAEDQEG CFEAEGIHAA GVLPTFAITY DQATGEIVKE CDGADEEGAN EYLTCIEPQG EGNNQWTW
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