Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_07441 |
Symbol | pncA |
ID | 5730662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 648409 |
End bp | 649029 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641285107 |
Product | isochorismatase hydrolase family protein |
Protein accession | YP_001550629 |
Protein GI | 159903285 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0995992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAACA ATTTTATTAA GTTAAGAGGA GTTAGAAGAA AAGAAATAGA TCCTAAGAAT AGTTTATTAA TGAGCAGAGA TAATACAGCT CTAATAGTTA TGGATATACA AGAAAAGCTG ATTAAAGCAA TTCCTAATCG AAATGAACTC ACTTGGAATA CAAAGAAATT AATAGATGGT TTTAAAATAC TTAATATGGG AGTCTATATA ACTGAACAAA ATCCAGACAA GCTAGGGGAA TCAACAGAAA TAATTAACAA TATAGACGCG TATCCAAAAT TCGAAAAAAT GGATTTCAGT TGCTCAAACT GTATAGGGCT AAGTAAGGAG TTCAAAAGAA ATAACATCAA AAATATACTA TTTTGTGGTA TTGAAACACA TATCTGTATT CTCCAGAGTG CCATGGACTT TATTAATAAA GGCCATAAAG TATTTATTGC TGCTGACTGT ACAGGTAGCA GGAATAAGAT TGATCATGAC ACTGCAATTA AGCGATTAGA AGGTGCTGGC GCAACTATAT CTACAAGTGA AGCAGCTATT TTTGAGCTTT GCAGAACAGC TTTAGCTAAA GAATTCAAAG ATATTAGCGC TCTTATTAAA AGGGAAAGAT CCAATTCTTG A
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Protein sequence | MVNNFIKLRG VRRKEIDPKN SLLMSRDNTA LIVMDIQEKL IKAIPNRNEL TWNTKKLIDG FKILNMGVYI TEQNPDKLGE STEIINNIDA YPKFEKMDFS CSNCIGLSKE FKRNNIKNIL FCGIETHICI LQSAMDFINK GHKVFIAADC TGSRNKIDHD TAIKRLEGAG ATISTSEAAI FELCRTALAK EFKDISALIK RERSNS
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